Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P20
         (1288 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    31   0.055
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.51 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.6  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   6.3  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    24   8.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 31.5 bits (68), Expect = 0.055
 Identities = 26/103 (25%), Positives = 27/103 (26%), Gaps = 1/103 (0%)
 Frame = -1

Query: 1285 PXXFXPGXPXXXPKXPRXXXGFXPPPXGGPXPXXXPPXGXGXPPXPXXKXXXXXXXPGRT 1106
            P    PG        P    G   PP  G  P   PP   G  P P           G  
Sbjct: 233  PPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGG-PRPQISPQNSNLSGGMP 291

Query: 1105 XGPXG-XFPGXPXDFXXPXGXPPXXXXXFXXXXXGXGPXGKPP 980
             G  G   P  P     P G P      F     G     +PP
Sbjct: 292  SGMVGPPRPPMPMQGGAPGGPPQGMRPNFYNRPMGDPQTSRPP 334


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.51
 Identities = 21/70 (30%), Positives = 21/70 (30%)
 Frame = -1

Query: 1249 PKXPRXXXGFXPPPXGGPXPXXXPPXGXGXPPXPXXKXXXXXXXPGRTXGPXGXFPGXPX 1070
            P   R   GF   P   P P   PP   G PP P           G   GP G  P  P 
Sbjct: 564  PAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP--------LAGGPLGGPAGSRPPLPN 615

Query: 1069 DFXXPXGXPP 1040
                    PP
Sbjct: 616  LLGFGGAAPP 625


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 1155 GGXPXPXGGXXXGXGPPXGGG 1217
            GG P   GG   G GP  GGG
Sbjct: 209  GGAPGGGGGSSGGPGPGGGGG 229


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 801 TXTPSPRAXADSXXQXKPPXPPPXP 727
           T  PSP   A +     PP PPP P
Sbjct: 766 TGMPSPSRSAFADGIGSPPPPPPPP 790


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +3

Query: 78  RSIQLNMFETECSKLKRQLEEL 143
           R+++  ++ETE  + ++QLEEL
Sbjct: 221 RTLEYVIYETELKETRKQLEEL 242


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +2

Query: 689 TS*QQQXXXFYVXGXGGGXGGFXCXNESAXARGEGVXVWGALPXPRSXTXW 841
           T+ +Q+   + +   GGG GG  C  ++     +   +    P PR  T W
Sbjct: 5   TAAEQENYEYDLVVIGGGSGGLACAKQAVQLGAKVAVLDFVKPSPRG-TKW 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 908,302
Number of Sequences: 2352
Number of extensions: 16533
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147966414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)