BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_P17
(1301 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 41 0.002
07_03_1136 + 24218601-24218734,24218769-24219906 36 0.093
11_06_0610 - 25449085-25453284 34 0.28
03_01_0515 - 3864796-3865425 34 0.28
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.37
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.49
05_06_0282 + 26915249-26915881 31 1.5
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 31 1.5
04_03_0904 + 20717005-20718087 31 2.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 31 2.0
09_02_0603 - 11150739-11150746,11150791-11151340 31 2.6
08_01_0059 - 394001-394708 31 2.6
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 31 2.6
07_01_0479 + 3606663-3607448 30 3.5
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 30 3.5
09_04_0745 + 19884868-19886000,19886110-19886309,19886422-198866... 30 4.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 4.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 6.1
02_04_0021 + 18975992-18976408 29 6.1
07_01_0516 - 3850252-3852870 29 8.0
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373... 29 8.0
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/71 (30%), Positives = 23/71 (32%)
Frame = +3
Query: 567 PKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXK 746
P+ V PP PK P PPP P PP GPPP
Sbjct: 300 PQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
Query: 747 KXPXPPRKXXP 779
K P PP P
Sbjct: 360 KGPSPPPPPPP 370
Score = 33.9 bits (74), Expect = 0.28
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
PPK P P K PPP K PP PPP K P PP
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPP--PPPGGKKGGPPPP 380
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXP 780
PPP K PPP K P P GPPP K PP P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 32.7 bits (71), Expect = 0.65
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPP 765
PPP K G K PPP K P P PPP KK PP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPP--PPPPGGKKGGPPP 379
Score = 31.5 bits (68), Expect = 1.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 679 PPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP P P G PPP K PP P P
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSP 364
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 35.5 bits (78), Expect = 0.093
Identities = 26/116 (22%), Positives = 32/116 (27%)
Frame = +1
Query: 877 GCPXPGXXXPXPXXGGXXKXPPXGXXPGXXEXKXXGFXXPXKKXXXXGGGXXXGXKKKKK 1056
G P G P P GG + P G G + GGG G ++
Sbjct: 89 GLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVL 148
Query: 1057 XGGXGXGGKKXXXGXXXXXPKKKKKXXGXAGGXXXXXPKKXXXKXGXQKNPXXXXG 1224
GG G G G + G GG P G + P G
Sbjct: 149 GGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGG 204
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 33.9 bits (74), Expect = 0.28
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P +K PPP P PP PPP P PP K P
Sbjct: 1146 PPPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPP 1185
Score = 33.9 bits (74), Expect = 0.28
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P K PPP P PP PPP P PP K P
Sbjct: 1210 PPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPP 1249
Score = 33.1 bits (72), Expect = 0.49
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PP+K P P K PPP P PP PPP P PP K P
Sbjct: 1147 PPEKSPPPPAPVILPPPPI--KSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPP 1201
Score = 32.7 bits (71), Expect = 0.65
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P K PPP P PP PPP P PP K P
Sbjct: 1178 PPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPP 1217
Score = 32.7 bits (71), Expect = 0.65
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P K PPP P PP PPP P PP K P
Sbjct: 1194 PPPVKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPP 1233
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +3
Query: 567 PKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXK 746
P+++ V PP + P K PPP P PP PPP
Sbjct: 1100 PEESSPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPP-PPEKSPPPPAPV 1158
Query: 747 KXPXPPRKXXP 779
P PP K P
Sbjct: 1159 ILPPPPIKSPP 1169
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P PPP P PP GPP + P P K P
Sbjct: 559 PTASHSPPPVPEGHTPSPPKSGPP--AGESPPTPESKASP 596
Score = 29.5 bits (63), Expect = 6.1
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRK 770
PPK P P K PPP + P PP PP K P P K
Sbjct: 576 PPKSGPPAGESPPT---PESKASPPPTPEEYTPSPPKSTPP--AEKSPPTPESK 624
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/58 (25%), Positives = 20/58 (34%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXP 780
PPP+K T ++ PP K P PP + + PP K P
Sbjct: 991 PPPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPPAEKSQPPPSPVESVLPPVKSSP 1048
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 670 KKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
+K PPP P P PPP PP K P P
Sbjct: 1149 EKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPP 1187
>03_01_0515 - 3864796-3865425
Length = 209
Score = 33.9 bits (74), Expect = 0.28
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PPP P PP PPP K P PP P
Sbjct: 91 PPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PPP P PP PPP P PP P
Sbjct: 75 PPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P PPP P PP PPP P P K P
Sbjct: 77 PSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSP 116
Score = 29.1 bits (62), Expect = 8.0
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +1
Query: 679 PPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXP 780
PPP P P PPP+ K PP P
Sbjct: 91 PPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 33.5 bits (73), Expect = 0.37
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRK 770
PP P N + P PPP P PP PPP + P PPR+
Sbjct: 93 PPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPP-TQPPPREAQLAPPPPRE 145
Score = 29.1 bits (62), Expect = 8.0
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
P P N G P ++ PPP P PP PP P PP P
Sbjct: 60 PGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPP--PPYGVNSSQPPPPPPPPP 114
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.49
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PP P N P PPP P PP PPP PP P
Sbjct: 568 PPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPP 624
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPPXXKNFXRGFXXFFFFPXPXXPXPGP 329
P PPP G PPPPP + P P P P P
Sbjct: 549 PPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLP 595
>05_06_0282 + 26915249-26915881
Length = 210
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/58 (29%), Positives = 22/58 (37%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXP 780
PPP GG+ R + PPP P G PPPN ++ P + P
Sbjct: 136 PPPPDPNTPVQPLSGGDGRPRQLAPPP---------PMGNPPPNTHRRRTDRPPRRLP 184
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 31.5 bits (68), Expect = 1.5
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PPK P P K PP K P PP GP P P P K P
Sbjct: 169 PPKPKP---GPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKPKPGP 222
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 651 GGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRK 770
G P K PP P PP GP P K P P K
Sbjct: 160 GPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPK 199
Score = 29.5 bits (63), Expect = 6.1
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 2/73 (2%)
Frame = +3
Query: 567 PKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKK--XPPPXXXKKXPXPPXGGPPP*X 740
PK K K PK P P K PP K P PP GP P
Sbjct: 161 PKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPKPKPPKPGPKP-- 218
Query: 741 XKKXPXPPRKXXP 779
P PP+ P
Sbjct: 219 ---KPGPPQPWWP 228
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PP P P K PPP K P PP P P P PP+ P
Sbjct: 70 PPAYTPPKPTPTPPTYTPTPKPTPPPYTPK--PTPPAHTPTPPTYTPTPTPPKPTPP 124
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
P PPP P PP PPP KK PP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPP 387
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +3
Query: 603 KXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP 734
+ P + P+ N P G PPP P P G PPP
Sbjct: 21 RPPASRPPRLEKGNFALPPPFGFPPPPPPGSTFVPLPQSGVPPP 64
>08_01_0059 - 394001-394708
Length = 235
Score = 30.7 bits (66), Expect = 2.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
PPP ++ P PP PPP ++ P PP
Sbjct: 2 PPPPPPRRAPPPPATPPPP--PRRAPPPP 28
Score = 29.5 bits (63), Expect = 6.1
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXPF 782
P ++ PPP P PP PPP P PP P+
Sbjct: 5 PPPRRAPPPPATP--PPPPRRAPPPPSPPIRPPPPPTPRPY 43
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 30.7 bits (66), Expect = 2.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 1018 GGGXXXGXKKKKKXGGXGXGGKKXXXG 1098
GGG G KK KK GG G GG G
Sbjct: 212 GGGGGGGKKKGKKGGGGGGGGNGNGNG 238
Score = 30.3 bits (65), Expect = 3.5
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +1
Query: 1018 GGGXXXGXKKKKKXGGXGXGG 1080
GGG G KKK K GG G GG
Sbjct: 211 GGGGGGGGKKKGKKGGGGGGG 231
>07_01_0479 + 3606663-3607448
Length = 261
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 603 KXPPKKXPKXXNXNXXGGXPXGKK--XPPPXXXKKXPXPPXGGPPP 734
+ PP P GG P G + PPP P PP G P
Sbjct: 210 RGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQP 255
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 468 PXPPXGGGXFXXXXXXPPPPPXXKKTFXGGXXXFFFSPN 352
P PP G PPPPP KK+F F + N
Sbjct: 1936 PPPPVEGKPKPPPHAPPPPPPEAKKSFMRRMFPFLLAAN 1974
>09_04_0745 +
19884868-19886000,19886110-19886309,19886422-19886666,
19886880-19887668
Length = 788
Score = 29.9 bits (64), Expect = 4.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 669 KKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPR 767
K+ PPP + P PP PPP P PPR
Sbjct: 254 KRAPPPQSVRPPPPPPPPPPPP------PMPPR 280
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +3
Query: 651 GGXPXGKKXPP-PXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G P G PP P + P PP PPP PPR P
Sbjct: 255 GTLPNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPP 298
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = +3
Query: 561 GXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*X 740
G P GGV PP+ GG P P P P P G PPP
Sbjct: 1172 GTPPPNAHGGVAPPPPPPR------GHGGVGGPPTPPGAPAPPMP---PGVPGGPPPPPG 1222
Query: 741 XKKXPXPP 764
+ P PP
Sbjct: 1223 GRGLPAPP 1230
>02_04_0021 + 18975992-18976408
Length = 138
Score = 29.5 bits (63), Expect = 6.1
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGGPPP*XXKKXPXPPR 767
PPP K P PP P P P PP+
Sbjct: 97 PPPPKPKPTPPPPAPTPKPPAPSPSPPPPK 126
>07_01_0516 - 3850252-3852870
Length = 872
Score = 29.1 bits (62), Expect = 8.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPR 767
P + PP P PP PPP P PPR
Sbjct: 10 PPPRLLPPQPPPTSRPLPPPPPPPPPAHGPSPPPPR 45
>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
32237909-32239263,32240399-32240460,32240544-32241144,
32241229-32241310,32241778-32241840
Length = 1111
Score = 29.1 bits (62), Expect = 8.0
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +3
Query: 651 GGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G +K PPP P PP PPP + P PP P
Sbjct: 955 GSAQQSEKRPPPP-----PPPPNVAPPPFTRQDIPPPPPSPPP 992
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.145 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,285,459
Number of Sequences: 37544
Number of extensions: 563494
Number of successful extensions: 2202
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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