Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P17
         (1301 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   2.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   2.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   4.8  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   4.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 13/37 (35%), Positives = 14/37 (37%)
 Frame = +3

Query: 654 GXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
           G P G   PPP        PP   PPP    + P  P
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFP 561


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +3

Query: 612 PKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPP 731
           P+      N N  GG P G   PP     + P P  GG P
Sbjct: 275 PRPQISPQNSNLSGGMPSGMVGPP-----RPPMPMQGGAP 309


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -1

Query: 431 GXXXPPPPPXXKKLXPG 381
           G   PPPPP    L PG
Sbjct: 781 GSPPPPPPPPPSSLSPG 797


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 18/58 (31%), Positives = 24/58 (41%)
 Frame = +3

Query: 972  KKXGVXSPXXKKXXXGGXXXXGXXKKKKKXGXGXGGKKXXXXGXXXXPQKKKKKXGXG 1145
            K+ G   P  +K   GG    G  K+K+K   G GG            +K+KKK   G
Sbjct: 938  KRKGEKKP--RKSQGGG----GSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASG 989



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 18/62 (29%), Positives = 24/62 (38%)
 Frame = +1

Query: 967  EXKXXGFXXPXKKXXXXGGGXXXGXKKKKKXGGXGXGGKKXXXGXXXXXPKKKKKXXGXA 1146
            E K  G   P K     GGG     K+K + G  G    +   G       +K+K  G +
Sbjct: 936  ERKRKGEKKPRKSQ---GGGGSRKRKEKARRGSGGDSDSEEEEGEG----SRKRKKKGAS 988

Query: 1147 GG 1152
            GG
Sbjct: 989  GG 990


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.145    0.480 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,540
Number of Sequences: 2352
Number of extensions: 9985
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 150010149
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)