Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_P17
(1301 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.004
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.004
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 33 0.33
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 33 0.44
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 1.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 2.4
Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical pr... 31 2.4
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 2.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 2.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 2.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 4.1
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 4.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 4.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 25 6.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 7.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 7.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 7.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 7.2
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 9.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 9.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 9.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 9.5
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +3
Query: 570 KKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKK 749
++A G PPK P P PPP P PP G PPP
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP-PPTGSPPPPPAGG 287
Query: 750 XPXPPRKXXP 779
P PPR P
Sbjct: 288 SPPPPRAGSP 297
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGG--PPP*XXKKXPXPPRKXXP 779
PPP P PP GG PPP P PP + P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 307
Score = 32.3 bits (70), Expect = 0.77
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP K PPP P P G PPP PP P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 787 XXXXXG 804
G
Sbjct: 300 PPPPRG 305
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 666 GKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
GK+ PP P PP G PP P PP P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP 264
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXX-GXXXPP 414
PP G PP GG PP G L PP GG G PP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS---LPPPQAGGSPPPAGTGSPP 330
Query: 413 PPPXXKKLXP 384
PPP K+ P
Sbjct: 331 PPPRQKRQAP 340
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
P PPP P P G PPP P PP
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +3
Query: 552 PXXGXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPP 731
P G P GG PP+ G P G PPP P G PP
Sbjct: 275 PPTGSPPPPPAGG---SPPPPRAGSPPPPPPPRGSPPTGS-LPPPQAGGSPPPAGTGSPP 330
Query: 732 P*XXKKXPXPPR 767
P +K P R
Sbjct: 331 PPPRQKRQAPER 342
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GG PPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPP 301
Score = 28.7 bits (61), Expect(2) = 1.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 679 PPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP K P G PPP PP P P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 25.8 bits (54), Expect(2) = 8.0
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1
Query: 670 KKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
K+ PP P P G PP PP P P
Sbjct: 228 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 266
Score = 21.4 bits (43), Expect(2) = 8.0
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 883 PXPGXXXPXPXXGGXXKXPPXGXXP 957
P P P P G PP G P
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSP 289
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 883 PXPGXXXPXPXXGGXXKXPPXGXXP 957
P P P P GG P G P
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +3
Query: 570 KKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKK 749
++A G PPK P P PPP P PP G PPP
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP-PPTGSPPPPPAGG 308
Query: 750 XPXPPRKXXP 779
P PPR P
Sbjct: 309 SPPPPRAGSP 318
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGG--PPP*XXKKXPXPPRKXXP 779
PPP P PP GG PPP P PP + P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 328
Score = 32.3 bits (70), Expect = 0.77
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP K PPP P P G PPP PP P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 787 XXXXXG 804
G
Sbjct: 321 PPPPRG 326
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 666 GKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
GK+ PP P PP G PP P PP P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP 285
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXX-GXXXPP 414
PP G PP GG PP G L PP GG G PP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS---LPPPQAGGSPPPAGTGSPP 351
Query: 413 PPPXXKKLXP 384
PPP K+ P
Sbjct: 352 PPPRQKRQAP 361
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
P PPP P P G PPP P PP
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +3
Query: 552 PXXGXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPP 731
P G P GG PP+ G P G PPP P G PP
Sbjct: 296 PPTGSPPPPPAGG---SPPPPRAGSPPPPPPPRGSPPTGS-LPPPQAGGSPPPAGTGSPP 351
Query: 732 P*XXKKXPXPPR 767
P +K P R
Sbjct: 352 PPPRQKRQAPER 363
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GG PPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPP 322
Score = 28.7 bits (61), Expect(2) = 1.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 679 PPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP K P G PPP PP P P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 25.8 bits (54), Expect(2) = 8.0
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1
Query: 670 KKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
K+ PP P P G PP PP P P
Sbjct: 249 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 287
Score = 21.4 bits (43), Expect(2) = 8.0
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 883 PXPGXXXPXPXXGGXXKXPPXGXXP 957
P P P P G PP G P
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSP 310
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 883 PXPGXXXPXPXXGGXXKXPPXGXXP 957
P P P P GG P G P
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +3
Query: 570 KKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKK 749
++A G PPK P P PPP P PP G PPP
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP-PPTGSPPPPPAGG 293
Query: 750 XPXPPRKXXP 779
P PPR P
Sbjct: 294 SPPPPRAGSP 303
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGG--PPP*XXKKXPXPPRKXXP 779
PPP P PP GG PPP P PP + P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP 313
Score = 32.3 bits (70), Expect = 0.77
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 607 PPPKKXQKXXTXXXGGEXRXXKKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP K PPP P P G PPP PP P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 787 XXXXXG 804
G
Sbjct: 306 PPPPRG 311
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 666 GKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
GK+ PP P PP G PP P PP P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSP 270
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXX-GXXXPP 414
PP G PP GG PP G L PP GG G PP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS---LPPPQAGGSPPPAGTGSPP 336
Query: 413 PPPXXKKLXP 384
PPP K+ P
Sbjct: 337 PPPRQKRQAP 346
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
P PPP P P G PPP P PP
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/72 (29%), Positives = 23/72 (31%)
Frame = +3
Query: 552 PXXGXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPP 731
P G P GG PP+ G P G PPP P G PP
Sbjct: 281 PPTGSPPPPPAGG---SPPPPRAGSPPPPPPPRGSPPTGS-LPPPQAGGSPPPAGTGSPP 336
Query: 732 P*XXKKXPXPPR 767
P +K P R
Sbjct: 337 PPPRQKRQAPER 348
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GG PPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPP 307
Score = 28.7 bits (61), Expect(2) = 1.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 679 PPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
PPP K P G PPP PP P P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 25.8 bits (54), Expect(2) = 8.0
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1
Query: 670 KKXPPPXXKKKXPXXPXGGPPPNXXKKXLXPPXKXXPXP 786
K+ PP P P G PP PP P P
Sbjct: 234 KRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 272
Score = 21.4 bits (43), Expect(2) = 8.0
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 883 PXPGXXXPXPXXGGXXKXPPXGXXP 957
P P P P G PP G P
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSP 295
Score = 21.0 bits (42), Expect(2) = 1.7
Identities = 9/25 (36%), Positives = 9/25 (36%)
Frame = +1
Query: 883 PXPGXXXPXPXXGGXXKXPPXGXXP 957
P P P P GG P G P
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPP 304
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/57 (29%), Positives = 21/57 (36%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PP P + P G PP ++ P PP GPP P PP + P
Sbjct: 226 PPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPP--GPPTRRPPGPPGPPTRRPP 280
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 33.1 bits (72), Expect = 0.44
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 460 PPGGGGFXXXGXXXPPPPPXXKNFXRGF 377
PP GG F PPPPP ++ RGF
Sbjct: 478 PPRGGQFHGGSQQGPPPPPPSQHHPRGF 505
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
PPP K P P PPP K P P K P
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPP 208
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 660 PXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXP 761
P K PPP K P P PPP K P P
Sbjct: 177 PPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPP 210
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPPXXKNFXRGFXXFFFFPXPXXPXPG 332
P PPP GG G PPPPP G P P P PG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG------GLPPISGGPPPPPPPPG 766
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GGF G PPPPP
Sbjct: 771 PPPPPPPGGF--KGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +3
Query: 561 GXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPP----XGGP 728
G P GG+ P P G P PP P PP GGP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 729 PP*XXKKXPXPPRKXXP 779
PP P PP P
Sbjct: 785 PP------PPPPGMFAP 795
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 654 GXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G P PP P PP GG PP P PP P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXPPP 411
PP G PP G + G PP G + PP GG G PPP
Sbjct: 707 PPITG--GPPPPPG--LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 410 PP 405
PP
Sbjct: 763 PP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPPXXKNFXRGFXXFFFFPXPXXPXPG 332
P PPP GG G PPPPP G P P P PG
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPG------GLPPISGGPPPPPPPPG 766
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GGF G PPPPP
Sbjct: 771 PPPPPPPGGF--KGGPPPPPPP 790
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +3
Query: 561 GXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPP----XGGP 728
G P GG+ P P G P PP P PP GGP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 729 PP*XXKKXPXPPRKXXP 779
PP P PP P
Sbjct: 785 PP------PPPPGMFAP 795
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 654 GXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G P PP P PP GG PP P PP P
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXPPP 411
PP G PP G + G PP G + PP GG G PPP
Sbjct: 707 PPITG--GPPPPPG--LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 410 PP 405
PP
Sbjct: 763 PP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPPXXKNFXRGFXXFFFFPXPXXPXPG 332
P PPP GG G PPPPP G P P P PG
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPG------GLPPISGGPPPPPPPPG 349
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GGF G PPPPP
Sbjct: 354 PPPPPPPGGF--KGGPPPPPPP 373
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +3
Query: 561 GXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPP----XGGP 728
G P GG+ P P G P PP P PP GGP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 729 PP*XXKKXPXPPRKXXP 779
PP P PP P
Sbjct: 368 PP------PPPPGMFAP 378
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 654 GXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G P PP P PP GG PP P PP P
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/62 (32%), Positives = 22/62 (35%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXPPP 411
PP G PP G + G PP G + PP GG G PPP
Sbjct: 290 PPITG--GPPPPPG--LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 410 PP 405
PP
Sbjct: 346 PP 347
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGG---PPP*XXKKXPXPP 764
PP + G P + P P ++ P PP GG PPP + P P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGG---PPP*XXKKXPXPP 764
PP + G P + P P ++ P PP GG PPP + P P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>Z77136-8|CAB00885.2| 278|Caenorhabditis elegans Hypothetical
protein ZC376.8 protein.
Length = 278
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3
Query: 654 GXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKK 749
G P + PPP K P PP PP KK
Sbjct: 45 GAPSAESPPPPPPAPKVPEPPKAPPPADAVKK 76
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGG---PPP*XXKKXPXPP 764
PP + G P + P P ++ P PP GG PPP + P P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 3/55 (5%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGG---PPP*XXKKXPXPP 764
PP + G P + P P ++ P PP GG PPP + P P
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAP 802
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +3
Query: 627 KXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
K N N P PPP PP PPP K P PP
Sbjct: 56 KDPNDNIVKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPP 101
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXPPP 411
PP G+ PP P PP G + PP G G PPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Query: 410 PP 405
PP
Sbjct: 338 PP 339
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXP--PXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXP 417
PP G++ PP PG P P + PP G G P
Sbjct: 290 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
Query: 416 PPPPXXKKLXPGV 378
PPPP PG+
Sbjct: 350 PPPPRYPSAGPGM 362
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/62 (29%), Positives = 20/62 (32%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXPPXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXPPP 411
PP G+ PP P PP G + PP G G PPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Query: 410 PP 405
PP
Sbjct: 348 PP 349
Score = 29.9 bits (64), Expect = 4.1
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = -1
Query: 590 PPFLGLFXXPPXGGXLVXXXXPGXP--PXFXXXGXXXLXXXKXLXPPXGGGXFXXGXXXP 417
PP G++ PP PG P P + PP G G P
Sbjct: 300 PPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
Query: 416 PPPPXXKKLXPGV 378
PPPP PG+
Sbjct: 360 PPPPRYPSAGPGM 372
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/67 (31%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 540 NQXXPXXGXPKKAQKGGVXXXKXPPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPX 719
N+ P G P GG+ + P P + G P PPP P PP
Sbjct: 1551 NRGPPMGGLPPP--HGGMNGWRGGP---PPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPP 1605
Query: 720 --GGPPP 734
GGPPP
Sbjct: 1606 PNGGPPP 1612
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 609 PPKKXPKXXNXNXXGGXPXGKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXP 761
PP P G P PPP PP P P KK P P
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLP 1406
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 25.4 bits (53), Expect(2) = 6.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 407 GGGGGXXXXXXKXPPPXGGXG 469
GG GG PPP GG G
Sbjct: 202 GGSGGGSGRFPPPPPPYGGGG 222
Score = 22.2 bits (45), Expect(2) = 6.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +2
Query: 359 EKKKXXKPPXKVFXXXGGGGG 421
+++ PP F GGGGG
Sbjct: 174 DRRNRGLPPSNDFGPGGGGGG 194
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 666 GKKXPPPXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G PPP + PP PPP P P++ P
Sbjct: 135 GSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPP 172
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPPGG G G PPPPP
Sbjct: 662 PVPPPGGLG----GFMPPPPPP 679
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPPGG G G PPPPP
Sbjct: 662 PVPPPGGLG----GFMPPPPPP 679
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 654 GXPXGKKXPP-PXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G P G PP P + P PP PPP + PP P
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGP 372
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +3
Query: 654 GXPXGKKXPP-PXXXKKXPXPPXGGPPP*XXKKXPXPPRKXXP 779
G P G PP P + P PP PPP + PP P
Sbjct: 330 GPPRGFMPPPHPMMFRGGPYPPFFPPPPPHFMRPSSPPTDGGP 372
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP GGG+ PPPPP
Sbjct: 42 PPPPPCGGGYE---APPPPPPP 60
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP G G PPPPP
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPP 653
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 469 PXPPPGGGGFXXXGXXXPPPPP 404
P PPP G G PPPPP
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPP 479
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 9.5
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 678 PPPXXXKKXPXPPXGGPPP*XXKKXPXPP 764
PPP + P PP PPP P PP
Sbjct: 57 PPPCPAQFCPPPPICPPPPPPPMPCPPPP 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.145 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,721,784
Number of Sequences: 27780
Number of extensions: 353750
Number of successful extensions: 1438
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3631930622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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