Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P16
         (1269 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490...   181   9e-46
05_03_0012 - 7355493-7355645,7356309-7356370,7356885-7356972,735...   137   2e-32
05_06_0247 + 26661671-26661802,26661958-26662055,26662223-266622...    29   5.9  

>01_06_0717 - 31446860-31447074,31447183-31447270,31448909-31449012,
            31449618-31449745,31450461-31450555,31461823-31463115,
            31463188-31464039,31464568-31464621
          Length = 942

 Score =  181 bits (441), Expect = 9e-46
 Identities = 84/127 (66%), Positives = 102/127 (80%)
 Frame = +3

Query: 150  TLFMGADKNXNEDLIKWGWPEDVWFHVDKVSSAHVYLRLTPGQTIDDIPNLVLDDACQLV 329
            T++MGADKN NE+LIK+G PEDVWFHVDKVSSAHVYLRL  G++ID I + +L+D  QLV
Sbjct: 742  TIYMGADKNENEELIKYGLPEDVWFHVDKVSSAHVYLRLKKGESIDSICDGLLEDCAQLV 801

Query: 330  KANSILGNKMNDIDIVYTMWSNLKKTAGMEVGQVAFHKDREVRKAKVAKRNNEIVNRLNK 509
            KA+SI GNKMN++++VYT WSNLKK+  M+VGQV FH  R VR   V KR NEI+NRLNK
Sbjct: 802  KAHSIQGNKMNNVEVVYTPWSNLKKSPSMDVGQVGFHNTRMVRVVIVEKRVNEIINRLNK 861

Query: 510  TKTESFP 530
            T+ E  P
Sbjct: 862  TRVERRP 868


>05_03_0012 -
           7355493-7355645,7356309-7356370,7356885-7356972,
           7357677-7357780,7357931-7358010,7359127-7359183,
           7359924-7360036
          Length = 218

 Score =  137 bits (332), Expect = 2e-32
 Identities = 83/160 (51%), Positives = 94/160 (58%), Gaps = 19/160 (11%)
 Frame = +3

Query: 108 MVFYFTSSVVSPPVTLFMGADKNXNEDLIKWGWPEDV------------W-------FHV 230
           MVFYF     +   T+FMG DK  NEDLIK+G+PED+            W       FHV
Sbjct: 1   MVFYFKVRPEAGDYTIFMGLDKFENEDLIKYGFPEDICWLQIIGSVVHAWAIMIRKMFHV 60

Query: 231 DKVSSAHVYLRLTPGQTIDDIPNLVLDDACQLVKANSILGNKMNDIDIVYTMWSNLKKTA 410
           DK+SSAHVYLRL  GQT+DDI                  GNK N+ID+VYT W NLKKT 
Sbjct: 61  DKMSSAHVYLRLNKGQTMDDISE----------------GNKTNNIDVVYTPWYNLKKTP 104

Query: 411 GMEVGQVAFHKDREVRKAKVAKRNNEIVNRLNKTKTESFP 530
            M+VGQV FH  + VR  KV KR NEIVNRLNKTK E  P
Sbjct: 105 SMDVGQVGFHNSKLVRIVKVEKRINEIVNRLNKTKVERKP 144


>05_06_0247 +
           26661671-26661802,26661958-26662055,26662223-26662253,
           26662607-26662667,26662693-26662754,26662793-26662892,
           26663021-26663091,26663206-26663349,26663913-26663994,
           26664380-26664456
          Length = 285

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +3

Query: 339 SILGNKMN--DIDIVYTMWSNLKK--TAGMEVGQVAFHKDREVRKAKVAKRNNEIV 494
           +I+ NKM   D++ +Y+   N  K   +G  VG+V   +D   RKA++A+R+   +
Sbjct: 103 NIIDNKMFYFDLEGLYSFVKNFVKGVISGESVGEVIVVQDMHERKAEMARRSKAFI 158


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,267,938
Number of Sequences: 37544
Number of extensions: 349778
Number of successful extensions: 607
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)