Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P14
         (1233 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   2.4  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   9.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   9.6  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 606 TDAELLCINLKTKC 647
           +DAEL+C+   TKC
Sbjct: 288 SDAELICVTTGTKC 301


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 253 CNNSGIQSRQNCSKSIWQQRHCNT 324
           CN S   S  +C   I  QRH +T
Sbjct: 374 CNISPRSSADSCQVGIMAQRHRDT 397


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 346 NGTRRTPTSCTRWSSRYDTSSIYGSWRSYGTTNDDGSTWANAANDGNETA 495
           NG+ R+P S +R S + +   I  S+ S  T N   +T     +  ++T+
Sbjct: 320 NGSPRSPESNSRCSVKREKIKISVSYPSTETLNTKCNTLERTPSKCSQTS 369


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,462
Number of Sequences: 438
Number of extensions: 3776
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42022050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)