Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P13
         (1275 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    30   4.0  
Z68113-1|CAA92151.1|  321|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z49128-5|CAA88955.1|  676|Caenorhabditis elegans Hypothetical pr...    29   9.3  
Z29443-2|CAA82581.1|  648|Caenorhabditis elegans Hypothetical pr...    29   9.3  
Z29443-1|CAA82576.1|  649|Caenorhabditis elegans Hypothetical pr...    29   9.3  

>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +2

Query: 536 TLKEFYQKYNPPIRAHKHTCVGLGMEVIKRLKLLEKDF 649
           TLK   Q+YNPP  +++  C G   ++ K  +L+++ +
Sbjct: 91  TLKRSMQRYNPPQSSNQMYCPGCNRQIRKVQELMDERY 128


>Z68113-1|CAA92151.1|  321|Caenorhabditis elegans Hypothetical
           protein E03G2.1 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = +2

Query: 608 MEVIKRLKLLE-KDFPGITKAMMLVSCDENIEDLDDYTTSFPGPQGFLIETXKDH-VLXA 781
           M+  K+  LLE ++   + KA M V    N+E+ +++ +S PGP    I+  K H  L  
Sbjct: 216 MQKRKQQNLLEARELRLVKKAKMSVRGIRNMEEAEEFDSSLPGPS--TIKMLKTHSQLRT 273

Query: 782 IHVKVDGRPGVFLSDLG 832
           + + +  + G  +S+ G
Sbjct: 274 MLLPLRKKGGTKISEFG 290


>Z49128-5|CAA88955.1|  676|Caenorhabditis elegans Hypothetical
           protein M03C11.5 protein.
          Length = 676

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +2

Query: 536 TLKEFYQKYNPPIRAHKHTCVGLGMEVIKRLKLLEKDFPGITKAMMLVSCD 688
           TL   Y K   P+  HK T +  G  +     L EKD   +TKA ML + D
Sbjct: 467 TLVSLYTKDATPL--HKVTIIPRGQSLGHTAMLPEKDSYQLTKAQMLATLD 515


>Z29443-2|CAA82581.1|  648|Caenorhabditis elegans Hypothetical
           protein T07C4.3b protein.
          Length = 648

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
 Frame = +2

Query: 422 ELVAKAEVLLSRLVVSENYDS----ISNFLTHYDAYMASPIDTLKEFYQKYNPPIRAHKH 589
           E + KA+ +++ +V++E+ D+    +   ++H DA ++   +  +E      PP+ A + 
Sbjct: 269 EKLFKAQEIVAPIVLTESIDAAFEAVIQSVSHADATLSMTQNASEEAKVHATPPLPAERK 328

Query: 590 TCVGLGMEVIKRLK-LLEKDFPGITKA 667
           T V   +   K +K L+EK   G+  A
Sbjct: 329 TMVSAELANGKPIKHLIEKFDAGVNFA 355


>Z29443-1|CAA82576.1|  649|Caenorhabditis elegans Hypothetical
           protein T07C4.3a protein.
          Length = 649

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
 Frame = +2

Query: 422 ELVAKAEVLLSRLVVSENYDS----ISNFLTHYDAYMASPIDTLKEFYQKYNPPIRAHKH 589
           E + KA+ +++ +V++E+ D+    +   ++H DA ++   +  +E      PP+ A + 
Sbjct: 270 EKLFKAQEIVAPIVLTESIDAAFEAVIQSVSHADATLSMTQNASEEAKVHATPPLPAERK 329

Query: 590 TCVGLGMEVIKRLK-LLEKDFPGITKA 667
           T V   +   K +K L+EK   G+  A
Sbjct: 330 TMVSAELANGKPIKHLIEKFDAGVNFA 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,613,758
Number of Sequences: 27780
Number of extensions: 372752
Number of successful extensions: 913
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)