Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P07
         (1297 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical...    75   1e-13
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    32   1.0  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    31   1.8  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    31   1.8  
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ...    30   4.1  
AF000263-15|AAG00018.1|  416|Caenorhabditis elegans Hypothetical...    29   5.4  
Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical pr...    29   9.5  

>AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.5 protein.
          Length = 121

 Score = 74.9 bits (176), Expect = 1e-13
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = +3

Query: 186 PNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAG 365
           P   + R C+  YVDFHRC ++ G+ Y+PC +F+ VY+  CP  W ++WD   +EG F  
Sbjct: 58  PQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFPA 117

Query: 366 R 368
           +
Sbjct: 118 K 118


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +1

Query: 175 PTGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 354
           P  S     RG   K      +A+K  A     A  S+  + +SAP + + + T+SAP A
Sbjct: 395 PAKSAPAPPRGAPAKAAKAEAIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-A 453

Query: 355 PSPVGFR 375
            +P   R
Sbjct: 454 TAPEASR 460


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +1

Query: 175 PTGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 354
           P  S     RG   K      +A+K  A     A  S+  + +SAP + + + T+SAP A
Sbjct: 373 PARSAPAPPRGAPAKAPKAEPIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-A 431

Query: 355 PSPVGFR 375
            +P   R
Sbjct: 432 TAPEASR 438


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +1

Query: 175  PTGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 354
            P  S T       T  T +ST+     + +T H T+S+  +G ++P + S +G+T    +
Sbjct: 1413 PVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSGSTSPSTNSQTGSTVTMGS 1472

Query: 355  PSPVG 369
             S  G
Sbjct: 1473 SSTSG 1477


>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
           protein Y51B11A.1 protein.
          Length = 1079

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +1

Query: 163 STFRPTGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS---- 330
           ST  P+ S T ++  T T    TST A   +       T +   T  + P S STS    
Sbjct: 85  STEPPSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQT 144

Query: 331 GTTSAPKAPSPVGFRS*TFPM 393
            TT+AP+  S     S T P+
Sbjct: 145 TTTTAPETTSTEAPSSSTTPV 165


>AF000263-15|AAG00018.1|  416|Caenorhabditis elegans Hypothetical
           protein T08B2.11 protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 196 IRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 354
           ++ G AT+    S   ++     T H    ++ + LSA + G TSG   APKA
Sbjct: 77  VKEGKATRRKEKSIEKKEHEQPKTTHR---KKKSSLSASLEGKTSGENEAPKA 126


>Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical
           protein F15D4.4 protein.
          Length = 608

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/84 (22%), Positives = 33/84 (39%)
 Frame = +1

Query: 133 DDQIARRPQNSTFRPTGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAP 312
           +D++    +  T   T S T     T T  T TST     +   +  +T +   T  SAP
Sbjct: 507 EDEVDEEDKEETSTTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAP 566

Query: 313 MSGSTSGTTSAPKAPSPVGFRS*T 384
           +    + T +  +  +    R+ T
Sbjct: 567 IRAVRTSTPTTRRTTTTTPRRTTT 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,562,282
Number of Sequences: 27780
Number of extensions: 348635
Number of successful extensions: 900
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3611117266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)