Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P06
         (1367 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.       133   1e-32
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    30   0.14 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.71 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    27   1.7  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   6.7  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    21   8.6  

>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score =  133 bits (322), Expect = 1e-32
 Identities = 66/70 (94%), Positives = 66/70 (94%)
 Frame = +2

Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
           VLRDNIQG TKPAIRRLARRGGVKRISGLIYEE R VLKVFLENVIRDAV YTEHAKRKT
Sbjct: 22  VLRDNIQGTTKPAIRRLARRGGVKRISGLIYEERRGVLKVFLENVIRDAVAYTEHAKRKT 81

Query: 314 VTAMDVVYAL 343
           VTAMDVVYAL
Sbjct: 82  VTAMDVVYAL 91


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 30.3 bits (65), Expect = 0.14
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = -1

Query: 902 GXXGXXGGGXGXGGPKXKXXXPGGGGG 822
           G  G  GG  G GG       PGGGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGGG 229


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect(2) = 0.71
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
           PPPPP        PP   PPP
Sbjct: 531 PPPPPPGGAVLNIPPQFLPPP 551



 Score = 24.6 bits (51), Expect = 6.7
 Identities = 12/45 (26%), Positives = 12/45 (26%)
 Frame = +1

Query: 832 PPGXXXXXXGPPXPXPPPXXPXXPXXXXXXXXXXXXPXGGXXXXP 966
           P G        P P PPP  P  P            P G     P
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 21.0 bits (42), Expect(2) = 0.71
 Identities = 10/35 (28%), Positives = 10/35 (28%)
 Frame = +1

Query: 865 PXPXPPPXXPXXPXXXXXXXXXXXXPXGGXXXXPP 969
           P   PPP  P  P            P GG     P
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRP 611


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 26.6 bits (56), Expect = 1.7
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 121 TAPESSQR*YSRNNEACHSKIGATRRRQTYIRPDLRGNTQRSKGFS 258
           T   ++ R YSR NE C S  G   +R++ ++P  +G   +S  FS
Sbjct: 224 TPTSTTMRDYSRKNENCSSSGG---QRES-LKPKPKGKVAKSSEFS 265


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.6 bits (51), Expect = 6.7
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +3

Query: 114 ARNGTGKFSEIIFKE*RSLPFEDWR-----DAAASN 206
           +R GTG  S  + KE R    E+W+     DAAA N
Sbjct: 866 SRRGTGVSSSELRKEERQRTIEEWQTTWDADAAADN 901


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 21.0 bits (42), Expect(2) = 8.6
 Identities = 8/21 (38%), Positives = 8/21 (38%)
 Frame = +1

Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
           P P         G P P PPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPPP 789



 Score = 21.0 bits (42), Expect(2) = 8.6
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +1

Query: 862 PPXPXPPPXXPXXP 903
           PP P PPP     P
Sbjct: 783 PPPPPPPPPSSLSP 796


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,823
Number of Sequences: 2352
Number of extensions: 10882
Number of successful extensions: 50
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 157681260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)