Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_P06
(1367 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical p... 151 8e-37
Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical p... 151 8e-37
Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical pr... 151 8e-37
X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein... 151 8e-37
U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protei... 151 8e-37
U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protei... 151 8e-37
U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein... 151 8e-37
U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein... 151 8e-37
U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein... 151 8e-37
AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone prote... 151 8e-37
AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone prote... 151 8e-37
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.007
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.007
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.007
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 0.28
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.36
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.47
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.47
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.9
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 2.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 3.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 4.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 4.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 4.4
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 7.6
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 7.6
>Z93388-10|CAB07657.1| 103|Caenorhabditis elegans Hypothetical
protein T10C6.14 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z83245-8|CAB05839.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.8 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z83245-4|CAB05837.1| 103|Caenorhabditis elegans Hypothetical
protein ZK131.4 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z83245-1|CAB05835.4| 103|Caenorhabditis elegans Hypothetical
protein ZK131.1 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z82271-2|CAB05210.1| 103|Caenorhabditis elegans Hypothetical
protein F54E12.3 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z81128-5|CAB03396.1| 103|Caenorhabditis elegans Hypothetical
protein T23D8.5 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z73102-10|CAA97407.1| 103|Caenorhabditis elegans Hypothetical
protein B0035.9 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z70750-7|CAA94742.1| 103|Caenorhabditis elegans Hypothetical
protein C50F4.7 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>Z68336-1|CAA92734.1| 103|Caenorhabditis elegans Hypothetical
protein F22B3.1 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>X15634-1|CAA33643.1| 103|Caenorhabditis elegans Histone protein
protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>U64845-10|AAC48026.1| 103|Caenorhabditis elegans Histone protein 5
protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>U64843-10|AAF98220.1| 103|Caenorhabditis elegans Histone protein
18 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>U64843-3|AAF98223.1| 103|Caenorhabditis elegans Histone protein 28
protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>U58750-9|AAB00649.2| 103|Caenorhabditis elegans Histone protein 60
protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>U41625-6|AAA83329.1| 103|Caenorhabditis elegans Histone protein 38
protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>AF047656-2|AAC05101.1| 103|Caenorhabditis elegans Histone protein
31 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>AC024696-3|AAK84518.1| 103|Caenorhabditis elegans Histone protein
50 protein.
Length = 103
Score = 151 bits (367), Expect = 8e-37
Identities = 75/77 (97%), Positives = 75/77 (97%)
Frame = +2
Query: 134 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRSVLKVFLENVIRDAVTYTEHAKRKT 313
VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETR VLKVFLENVIRDAVTY EHAKRKT
Sbjct: 22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYCEHAKRKT 81
Query: 314 VTAMDVVYALKRQGRTL 364
VTAMDVVYALKRQGRTL
Sbjct: 82 VTAMDVVYALKRQGRTL 98
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.007
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXPXXXXXXXXXXXXP--XGGXXXXPPXXXGXXXXK 996
PPPPPG GPP P PP P P GG PP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 997 KXFXXXXPXXGPXXXXGPXXGXFXPXXPPPPXXXXKXXXPXXXG 1128
GP P G F P P P P G
Sbjct: 773 PPPPPGGFKGGPPPP--PPPGMFAPMAPVIPDYLPPKKVPKVDG 814
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.007
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXPXXXXXXXXXXXXP--XGGXXXXPPXXXGXXXXK 996
PPPPPG GPP P PP P P GG PP G
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 997 KXFXXXXPXXGPXXXXGPXXGXFXPXXPPPPXXXXKXXXPXXXG 1128
GP P G F P P P P G
Sbjct: 773 PPPPPGGFKGGPPPP--PPPGMFAPMAPVIPDYLPPKKVPKVDG 814
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.007
Identities = 29/104 (27%), Positives = 29/104 (27%), Gaps = 2/104 (1%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXPXXXXXXXXXXXXP--XGGXXXXPPXXXGXXXXK 996
PPPPPG GPP P PP P P GG PP G
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 997 KXFXXXXPXXGPXXXXGPXXGXFXPXXPPPPXXXXKXXXPXXXG 1128
GP P G F P P P P G
Sbjct: 356 PPPPPGGFKGGPPPP--PPPGMFAPMAPVIPDYLPPKKVPKVDG 397
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect(2) = 0.28
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 820 NPPPPPGXXXXXXGPPXPXPPPXXPXXP 903
N PPPPG PP P PP P P
Sbjct: 705 NAPPPPGIPGY---PPAPPPPGVGPPPP 729
Score = 23.8 bits (49), Expect(2) = 0.28
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 1018 PXXGPXXXXGPXXGXFXPXXPPPP 1089
P GP G F P PPPP
Sbjct: 722 PGVGPPPPQGIPPMGFDPNKPPPP 745
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.36
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP GPP P PPP
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPP 596
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP G P P PPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPP 582
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPP 583
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 3/56 (5%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXPXXXXXXXXXXXXP---XGGXXXXPPXXXG 981
PPPP G P PPP P P P GG PP G
Sbjct: 543 PPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.47
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 1/107 (0%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXP-XXPXXXXXXXXXXXXPXGGXXXXPPXXXGXXXXKK 999
PPPPP PP P P P P P G PP G
Sbjct: 264 PPPPPSVTPMP--PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 1000 XFXXXXPXXGPXXXXGPXXGXFXPXXPPPPXXXXKXXXPXXXGGXPP 1140
P G P + PPPP P PP
Sbjct: 322 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.47
Identities = 26/107 (24%), Positives = 27/107 (25%), Gaps = 1/107 (0%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXP-XXPXXXXXXXXXXXXPXGGXXXXPPXXXGXXXXKK 999
PPPPP PP P P P P P G PP G
Sbjct: 274 PPPPPSVTPMP--PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 1000 XFXXXXPXXGPXXXXGPXXGXFXPXXPPPPXXXXKXXXPXXXGGXPP 1140
P G P + PPPP P PP
Sbjct: 332 PSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.9 bits (69), Expect = 1.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXP 903
PPPPP P P PPP P P
Sbjct: 124 PPPPPRKSRAGGSSPPPPPPPRVPRTP 150
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 824 PPPPRXXGXXFXAPPXPXPP 883
PPPP G + APP P PP
Sbjct: 41 PPPPPPCGGGYEAPPPPPPP 60
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 883 GGXXGRGGXKXXPXXPGGGGGFXXXKKXPXPPPXXEKKK 767
GG G GG P PGGGGG P PP K +
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGG-GGPTGPPAPPKPPAKPR 653
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -2
Query: 883 GGXXGRGGXKXXPXXPGGGGGFXXXKKXPXPPPXXEKKK 767
GG G GG P PGGGGG P PP K +
Sbjct: 616 GGPGGPGGGGGPPRGPGGGGG-GGPTGPPAPPKPPAKPR 653
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/105 (24%), Positives = 26/105 (24%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXPXXXXXXXXXXXXPXGGXXXXPPXXXGXXXXKKX 1002
PPPP PP PP P P GG PP G
Sbjct: 367 PPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGP-GGYGPPPPGGPGAPG---- 421
Query: 1003 FXXXXPXXGPXXXXGPXXGXFXPXXPPPPXXXXKXXXPXXXGGXP 1137
P GP P G PPP P G P
Sbjct: 422 -SYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXPXXP 903
PPPPP PP P PPP P
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAP 1369
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP G P P PPP
Sbjct: 1359 PPPPPTMSKAPTGVPLPVPPP 1379
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP G P P PPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP G P P PPP
Sbjct: 794 PPPPPPLPPISSGAPPPPPPP 814
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 883 GGXXGRGGXKXXPXXPGGGGGFXXXKKXPXPPP 785
GG G GG GGGG+ P PPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 883 GGXXGRGGXKXXPXXPGGGGGFXXXKKXPXPPP 785
GG G GG GGGG+ P PPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.3 bits (65), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 817 KNPPPPPGXXXXXXGPPXPXPPPXXPXXP 903
K+PPPPP P PPP P P
Sbjct: 494 KSPPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPP 254
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 826 PPPPGXXXXXXGPPXPXPPPXXP 894
PPPP G P P PPP P
Sbjct: 234 PPPPPLPPVGAGAPPPPPPPPPP 256
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPP 91
Score = 29.1 bits (62), Expect = 7.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPPXXP 894
PPPPP P P PPP P
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPPP 93
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPP 240
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 826 PPPPGXXXXXXGPPXPXPPPXXP 894
PPPP G P P PPP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP PP P PPP
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPP 240
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 826 PPPPGXXXXXXGPPXPXPPPXXP 894
PPPP G P P PPP P
Sbjct: 220 PPPPPLPPVGAGAPPPPPPPPPP 242
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPP PG G P P PPP
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPP 542
Score = 29.5 bits (63), Expect = 5.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPP GPP P P P
Sbjct: 538 PPPPPPVGMANGGPPPPPPLP 558
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPP G G P P PPP
Sbjct: 635 PPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPP G G P P PPP
Sbjct: 461 PPPPMGLPAVGAGAPPPPPPP 481
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.1 bits (62), Expect = 7.6
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +1
Query: 823 PPPPPGXXXXXXGPPXPXPPP 885
PPPPPG PP P PPP
Sbjct: 2278 PPPPPGYMHT---PPLPPPPP 2295
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 29.1 bits (62), Expect = 7.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 902 GXXGXXGGGXGXGGPKXKXXXPGGGGGF 819
G G GGG GG + GGGGGF
Sbjct: 529 GGFGGRGGGGFRGGDRGGFRGRGGGGGF 556
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,290,997
Number of Sequences: 27780
Number of extensions: 310145
Number of successful extensions: 2721
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3860877538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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