Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P04
         (1281 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111697-1|AAI11698.1|  983|Homo sapiens RBM26 protein protein.        34   1.3  
BC041655-1|AAH41655.1|  980|Homo sapiens RNA binding motif prote...    34   1.3  
AL159974-2|CAI12923.3|  980|Homo sapiens RNA binding motif prote...    34   1.3  
AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif prote...    34   1.3  
AL139006-2|CAI95137.2|  980|Homo sapiens RNA binding motif prote...    34   1.3  
AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif prote...    34   1.3  
AK027456-1|BAB55125.1|  680|Homo sapiens protein ( Homo sapiens ...    34   1.3  

>BC111697-1|AAI11698.1|  983|Homo sapiens RBM26 protein protein.
          Length = 983

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 341 PPPPGLPPPPPILTPPPVNLRPPVP 365


>BC041655-1|AAH41655.1|  980|Homo sapiens RNA binding motif protein
           26 protein.
          Length = 980

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 341 PPPPGLPPPPPILTPPPVNLRPPVP 365


>AL159974-2|CAI12923.3|  980|Homo sapiens RNA binding motif protein
           26 protein.
          Length = 980

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 341 PPPPGLPPPPPILTPPPVNLRPPVP 365


>AL159974-1|CAI12921.2| 1008|Homo sapiens RNA binding motif protein
           26 protein.
          Length = 1008

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 342 PPPPGLPPPPPILTPPPVNLRPPVP 366


>AL139006-2|CAI95137.2|  980|Homo sapiens RNA binding motif protein
           26 protein.
          Length = 980

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 341 PPPPGLPPPPPILTPPPVNLRPPVP 365


>AL139006-1|CAI95136.1| 1008|Homo sapiens RNA binding motif protein
           26 protein.
          Length = 1008

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 342 PPPPGLPPPPPILTPPPVNLRPPVP 366


>AK027456-1|BAB55125.1|  680|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14550 fis, clone NT2RM2001696. ).
          Length = 680

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = -1

Query: 942 PPPPGXXPPPXXXXXPXVXKXPPXP 868
           PPPPG  PPP     P V   PP P
Sbjct: 38  PPPPGLPPPPPILTPPPVNLRPPVP 62


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,396,901
Number of Sequences: 237096
Number of extensions: 1725393
Number of successful extensions: 7105
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5369
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18385440820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)