Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P03
         (1297 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096210-1|AAH96210.1|  309|Homo sapiens PRB3 protein protein.         35   0.74 
BC096209-1|AAH96209.1|  309|Homo sapiens PRB3 protein protein.         35   0.74 
X07881-1|CAA30728.1|  309|Homo sapiens proline-rich protein G1 p...    32   5.2  
BC096211-1|AAH96211.1|  309|Homo sapiens PRB3 protein protein.         32   5.2  

>BC096210-1|AAH96210.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 34.7 bits (76), Expect = 0.74
 Identities = 38/165 (23%), Positives = 40/165 (24%), Gaps = 7/165 (4%)
 Frame = -1

Query: 1279 PPPXGXXPXPXXXPXXGXXXXXPPXPXGEXXXXXPXXXXVXXGGXXGGFXGGXPXXXXXX 1100
            PPP G        P  G     PP    +     P           GG     P      
Sbjct: 81   PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK 140

Query: 1099 PXGXPP----XXXGXXFXXXXXXGAGPXGXNP---PXPALXXXSGPXXXPLXXXFFPXXS 941
            P G PP       G         G  P G N    P P      GP          P   
Sbjct: 141  PEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 200

Query: 940  PDXXXXPXXPXGGXDXPXPXXXXRXXESXXEEXEXPPIXQPPXPG 806
            P     P  P GG     P       E    +    P   PP PG
Sbjct: 201  PGKPEGP-PPQGGNQSQGPPPRPGKPEGSPSQGGNKPQGPPPHPG 244


>BC096209-1|AAH96209.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 34.7 bits (76), Expect = 0.74
 Identities = 38/165 (23%), Positives = 40/165 (24%), Gaps = 7/165 (4%)
 Frame = -1

Query: 1279 PPPXGXXPXPXXXPXXGXXXXXPPXPXGEXXXXXPXXXXVXXGGXXGGFXGGXPXXXXXX 1100
            PPP G        P  G     PP    +     P           GG     P      
Sbjct: 81   PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK 140

Query: 1099 PXGXPP----XXXGXXFXXXXXXGAGPXGXNP---PXPALXXXSGPXXXPLXXXFFPXXS 941
            P G PP       G         G  P G N    P P      GP          P   
Sbjct: 141  PEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 200

Query: 940  PDXXXXPXXPXGGXDXPXPXXXXRXXESXXEEXEXPPIXQPPXPG 806
            P     P  P GG     P       E    +    P   PP PG
Sbjct: 201  PGKPEGP-PPQGGNQSQGPPPRPGKPEGSPSQGGNKPQGPPPHPG 244


>X07881-1|CAA30728.1|  309|Homo sapiens proline-rich protein G1
            protein.
          Length = 309

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 37/164 (22%), Positives = 39/164 (23%), Gaps = 7/164 (4%)
 Frame = -1

Query: 1276 PPXGXXPXPXXXPXXGXXXXXPPXPXGEXXXXXPXXXXVXXGGXXGGFXGGXPXXXXXXP 1097
            PP G        P  G     PP    +     P           GG     P      P
Sbjct: 82   PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGEPEGPPPQGGNQSQGPPPHPGKP 141

Query: 1096 XGXPPXXX----GXXFXXXXXXGAGPXGXNP---PXPALXXXSGPXXXPLXXXFFPXXSP 938
             G PP       G         G  P G N    P P      GP          P   P
Sbjct: 142  EGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP 201

Query: 937  DXXXXPXXPXGGXDXPXPXXXXRXXESXXEEXEXPPIXQPPXPG 806
                 P  P GG     P       E    +    P   PP PG
Sbjct: 202  GKPEGPP-PQGGNQSQGPPPRPGKPEGSPSQGGNKPRGPPPHPG 244



 Score = 31.1 bits (67), Expect = 9.2
 Identities = 37/165 (22%), Positives = 39/165 (23%), Gaps = 7/165 (4%)
 Frame = -1

Query: 1279 PPPXGXXPXPXXXPXXGXXXXXPPXPXGEXXXXXPXXXXVXXGGXXGGFXGGXPXXXXXX 1100
            PPP G        P  G     PP    +     P           GG     P      
Sbjct: 60   PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGE 119

Query: 1099 PXGXPP----XXXGXXFXXXXXXGAGPXGXNP---PXPALXXXSGPXXXPLXXXFFPXXS 941
            P G PP       G         G  P G N    P P      GP          P   
Sbjct: 120  PEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 179

Query: 940  PDXXXXPXXPXGGXDXPXPXXXXRXXESXXEEXEXPPIXQPPXPG 806
            P     P  P GG     P       E    +        PP PG
Sbjct: 180  PGKPEGP-PPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 223


>BC096211-1|AAH96211.1|  309|Homo sapiens PRB3 protein protein.
          Length = 309

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 38/167 (22%), Positives = 40/167 (23%), Gaps = 9/167 (5%)
 Frame = -1

Query: 1279 PPPXGXXPXPXXXPXXGXXXXXPPXPXGEXXXXXPXXXXVXXGGXXGGFXGGXPXXXXXX 1100
            PPP G        P  G     PP    +     P           GG     P      
Sbjct: 81   PPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGK 140

Query: 1099 PXGXPP----XXXGXXFXXXXXXGAGPXGXN-----PPXPALXXXSGPXXXPLXXXFFPX 947
            P G PP       G         G  P G N     PP P       P          P 
Sbjct: 141  PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQG--PP 198

Query: 946  XSPDXXXXPXXPXGGXDXPXPXXXXRXXESXXEEXEXPPIXQPPXPG 806
              P     P  P GG     P       E    +    P   PP PG
Sbjct: 199  PRPGKPEGP-PPQGGNQSQGPPPRPGKPEGSPSQGGNKPQGPPPHPG 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,280,978
Number of Sequences: 237096
Number of extensions: 2599965
Number of successful extensions: 3517
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3224
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18660671970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)