Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P03
         (1297 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    27   0.47 
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    27   0.47 
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    27   0.47 
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    27   0.47 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    27   0.47 
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    24   3.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    24   3.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    24   3.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    24   3.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    24   3.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   7.7  

>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 467 NNNYNNNCHK 438
           NNNYNNNC K
Sbjct: 102 NNNYNNNCKK 111


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 467 NNNYNNNCHK 438
           NNNYNNNC K
Sbjct: 102 NNNYNNNCKK 111


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 467 NNNYNNNCHK 438
           NNNYNNNC K
Sbjct: 102 NNNYNNNCKK 111


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 467 NNNYNNNCHK 438
           NNNYNNNC K
Sbjct: 102 NNNYNNNCKK 111


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -3

Query: 467 NNNYNNNCHK 438
           NNNYNNNC K
Sbjct: 344 NNNYNNNCKK 353


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 467 NNNYNNNCHKR 435
           NNNYNNN +K+
Sbjct: 99  NNNYNNNNYKK 109


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 467 NNNYNNNCHKR 435
           NNNYNNN +K+
Sbjct: 99  NNNYNNNNYKK 109


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 467 NNNYNNNCHKR 435
           NNNYNNN +K+
Sbjct: 99  NNNYNNNNYKK 109


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 467 NNNYNNNCHKR 435
           NNNYNNN +K+
Sbjct: 99  NNNYNNNNYKK 109


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 5/19 (26%)
 Frame = -3

Query: 479 KTLQNNN-----YNNNCHK 438
           KT+ NNN     YNNNC K
Sbjct: 88  KTIHNNNNYKYNYNNNCKK 106


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 131 HVRNWIEHDIVLLSVGXSSSKH 196
           H+RN +E   VL+ +G  +S+H
Sbjct: 63  HLRNCLEKLKVLVPLGPETSRH 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,737
Number of Sequences: 438
Number of extensions: 5886
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44543373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)