Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P02
         (1298 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   5.0  
AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash pro...    23   6.6  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 137 NNLRRFLDGFSPDTTHGLKLYSAAFDKNXRGAXXNL 30
           N +++  +GF+    H     +AAF+ N RG    L
Sbjct: 63  NRVKQVNNGFANLRQHIPNFIAAAFESNSRGGNKKL 98


>AJ536347-1|CAD60438.1|   40|Tribolium castaneum putative Ash
           protein protein.
          Length = 40

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 116 DGFSPDTTHGLKLYSAAFDKNXRGAXXNLK 27
           +GF+    H     +AAF+ N RG    LK
Sbjct: 10  NGFANLRQHIPNFIAAAFESNSRGGNKKLK 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,726
Number of Sequences: 336
Number of extensions: 1920
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38329853
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)