Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_P01
(1271 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4977 Cluster: PREDICTED: similar to selenoprot... 85 4e-15
UniRef50_Q4PMN9 Cluster: Salivary selenoprotein M; n=1; Ixodes s... 83 1e-14
UniRef50_A5J2A1 Cluster: Selenoprotein M; n=1; Litopenaeus vanna... 81 5e-14
UniRef50_UPI0000D56FD2 Cluster: PREDICTED: similar to Selenoprot... 81 8e-14
UniRef50_Q8WWX9 Cluster: Thioredoxin-like selenoprotein M precur... 77 1e-12
UniRef50_Q4A3I8 Cluster: Selenoprotein M; n=1; Suberites domuncu... 60 9e-08
UniRef50_Q8H6T5 Cluster: Selenoprotein SelM2; n=1; Chlamydomonas... 57 8e-07
UniRef50_UPI0000D9C91D Cluster: PREDICTED: similar to selenoprot... 54 1e-05
UniRef50_O60613 Cluster: 15 kDa selenoprotein precursor; n=29; E... 40 0.10
UniRef50_UPI00005A4A0E Cluster: PREDICTED: similar to selenoprot... 40 0.14
UniRef50_Q8H6T0 Cluster: Selenoprotein SelM1; n=1; Chlamydomonas... 40 0.18
UniRef50_A5N9K8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
>UniRef50_UPI00015B4977 Cluster: PREDICTED: similar to selenoprotein
M; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
selenoprotein M - Nasonia vitripennis
Length = 117
Score = 85.0 bits (201), Expect = 4e-15
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +2
Query: 239 IESCRGCSLNRLPEVKRFVMDDAPNYDRVEVKFISGAPXEXILLGEGXH*LERXXLSHLN 418
+ESCRGC LNRLP+VK F+++D P YD E K I GAP E +L +ER + L
Sbjct: 35 VESCRGCQLNRLPDVKAFILEDVPLYDNAEFKHIQGAPPELVLYDHAEKEIERLQIGLLT 94
Query: 419 QEQXNELIQXKGFSNNK 469
+E+ NEL+ KGF +K
Sbjct: 95 REECNELMYEKGFKKSK 111
>UniRef50_Q4PMN9 Cluster: Salivary selenoprotein M; n=1; Ixodes
scapularis|Rep: Salivary selenoprotein M - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 129
Score = 83.0 bits (196), Expect = 1e-14
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +2
Query: 173 VXFCAVFVLSSEYELSD--IVSXRIESCRGCSLNRLPEVKRFVMDDAPNYDRVEVKFISG 346
V CA FV + E E +D IV R+ESC GC LN PEVK+FV DD P + VE K I G
Sbjct: 9 VLLCASFVSADEKEPADKVIVKARVESCGGCRLNAYPEVKKFVYDDIPLFHNVEFKVIGG 68
Query: 347 APXEXILLGEGXH*LERXXLSHLNQEQXNELIQXKGFSNNKK 472
A E + L +ER L ++++ N+L+ +GF K+
Sbjct: 69 AKPEVLFLNMNDEEVERHSLEGRSRDECNQLLLDRGFEKKKQ 110
>UniRef50_A5J2A1 Cluster: Selenoprotein M; n=1; Litopenaeus
vannamei|Rep: Selenoprotein M - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 131
Score = 81.4 bits (192), Expect = 5e-14
Identities = 40/101 (39%), Positives = 59/101 (58%)
Frame = +2
Query: 155 IXLLSVVXFCAVFVLSSEYELSDIVSXRIESCRGCSLNRLPEVKRFVMDDAPNYDRVEVK 334
+ LL ++ + L+ E + I R+ESC GC LNRLPEVK+F+ +D P + + K
Sbjct: 6 VQLLLLLGAVFSYTLAEELRETAIAKARVESCGGCRLNRLPEVKKFIHEDIPLFHNAKFK 65
Query: 335 FISGAPXEXILLGEGXH*LERXXLSHLNQEQXNELIQXKGF 457
I GAP E +LL +ER L L++E+ N+L+ KGF
Sbjct: 66 QIGGAPPELVLLNRFDQVVERLPLDKLSREECNKLMLKKGF 106
>UniRef50_UPI0000D56FD2 Cluster: PREDICTED: similar to Selenoprotein
M precursor (Protein SelM); n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Selenoprotein M
precursor (Protein SelM) - Tribolium castaneum
Length = 112
Score = 80.6 bits (190), Expect = 8e-14
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Frame = +2
Query: 149 MKIXLLSVVXFCAVFVLSSEYELSD--IVSXRIESCRGCSLNRLPEVKRFVMDDAPNYDR 322
MKI +V A L+S +D I R+ESC C LNRLPEVK F+ +D P YD
Sbjct: 1 MKICASLLVSCVAFLALASAEAANDSKIARARVESCPSCKLNRLPEVKAFIYEDLPKYDN 60
Query: 323 VEVKFISGAPXEXILLGEGXH*LERXXLSHLNQEQXNELIQXKGFSNNKK 472
E K I GAP + L + +E+ L ++++ N L++ KGF+ K
Sbjct: 61 TEFKKIQGAPPVLLFLNDADEIVEQHSLEKFSRQECNNLLKSKGFNIKNK 110
>UniRef50_Q8WWX9 Cluster: Thioredoxin-like selenoprotein M
precursor; n=15; Euteleostomi|Rep: Thioredoxin-like
selenoprotein M precursor - Homo sapiens (Human)
Length = 145
Score = 76.6 bits (180), Expect = 1e-12
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = +2
Query: 215 LSDIVSXRIESCRGCSLNRLPEVKRFVMDDAPNYDRVEVKFISGAPXEXILLGEGXH*LE 394
LS + R+E+C GC LNRL EVK FV D P Y + +K + GA E +LLG LE
Sbjct: 34 LSGLTRARVETCGGCQLNRLKEVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELE 93
Query: 395 RXXLSHLNQEQXNELIQXKGF 457
R LS + +E+ N L+Q GF
Sbjct: 94 RIPLSEMTREEINALVQELGF 114
>UniRef50_Q4A3I8 Cluster: Selenoprotein M; n=1; Suberites
domuncula|Rep: Selenoprotein M - Suberites domuncula
(Sponge)
Length = 123
Score = 60.5 bits (140), Expect = 9e-08
Identities = 26/76 (34%), Positives = 46/76 (60%)
Frame = +2
Query: 215 LSDIVSXRIESCRGCSLNRLPEVKRFVMDDAPNYDRVEVKFISGAPXEXILLGEGXH*LE 394
+ +I R+ESC GC LN LP+VKRF+ D P+Y +E+K+I GA +L+ +
Sbjct: 18 VGEIKKARLESCSGCRLNSLPKVKRFINDHLPDYPDLEIKYIGGADPVMVLMDAEYQEVT 77
Query: 395 RXXLSHLNQEQXNELI 442
R + +++++ +L+
Sbjct: 78 RVSVIKMSEQEIIDLL 93
>UniRef50_Q8H6T5 Cluster: Selenoprotein SelM2; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelM2 - Chlamydomonas
reinhardtii
Length = 138
Score = 57.2 bits (132), Expect = 8e-07
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +2
Query: 245 SCRGCSLNRLPEVKRFVMDDAPN---YDRVEVKFISGAPXEXILLGEGXH*LERXXLSHL 415
SC GC LN LPEVK+F+ D Y+ + V F+ G E +L E +ER + L
Sbjct: 29 SCPGCRLNHLPEVKKFIRGDIEKDKAYENLTVNFVPGRTPELVLYDENGVEIERMFVDKL 88
Query: 416 NQEQXNELIQXKGF 457
++ + L+Q KGF
Sbjct: 89 KYDELHTLVQSKGF 102
>UniRef50_UPI0000D9C91D Cluster: PREDICTED: similar to selenoprotein
M precursor; n=1; Macaca mulatta|Rep: PREDICTED: similar
to selenoprotein M precursor - Macaca mulatta
Length = 119
Score = 53.6 bits (123), Expect = 1e-05
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +2
Query: 275 PEVKRFVMDDAPNYDRVEVKFISGAPXEXILLGEGXH*LERXXLSHLNQEQXNELIQXKG 454
P+VK FV D P Y + +K + GA E +LLG LER LS + +E+ N L+Q G
Sbjct: 28 PQVKAFVTQDIPFYHNLVMKHLPGADPELVLLGRRYEELERIPLSEMTREEINALVQELG 87
Query: 455 F 457
F
Sbjct: 88 F 88
>UniRef50_O60613 Cluster: 15 kDa selenoprotein precursor; n=29;
Eumetazoa|Rep: 15 kDa selenoprotein precursor - Homo
sapiens (Human)
Length = 162
Score = 40.3 bits (90), Expect = 0.10
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 203 SEYELSDIVSXRIESCRGCSLNRLPEVKRFVMDDAPNYDR-VEVKFISGAPXEXILLGEG 379
+++E + + I GC L R P+V+ FV D P R +++K++ G+ LL +
Sbjct: 75 AQFETKKLYAGAILEVCGCKLGRFPQVQAFVRSDKPKLFRGLQIKYVRGSDPVLKLLDDN 134
Query: 380 XH*LERXXLSHLNQEQXNELIQXK 451
+ E + N + E + K
Sbjct: 135 GNIAEELSILKWNTDSVEEFLSEK 158
>UniRef50_UPI00005A4A0E Cluster: PREDICTED: similar to selenoprotein
M precursor; n=3; Laurasiatheria|Rep: PREDICTED: similar
to selenoprotein M precursor - Canis familiaris
Length = 74
Score = 39.9 bits (89), Expect = 0.14
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 329 VKFISGAPXEXILLGEGXH*LERXXLSHLNQEQXNELIQXKGF 457
+K + GA E +LLG LER LS + +E+ NEL+Q GF
Sbjct: 1 MKHLPGADPELVLLGHHYEELERIPLSEMTREEINELVQELGF 43
>UniRef50_Q8H6T0 Cluster: Selenoprotein SelM1; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelM1 - Chlamydomonas
reinhardtii
Length = 140
Score = 39.5 bits (88), Expect = 0.18
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Frame = +2
Query: 155 IXLLSVVXFCAVFVLSSE-YELSDIVSXRIE-SCRGCSLNRLPEVKRFVMDDA-PN-YDR 322
+ LL+V A S+ YEL++ + SC GC L LPEVKRF+ D PN Y
Sbjct: 10 LLLLTVAGAAAQEAASAPAYELNEAGQRMVFISCSGCRLKHLPEVKRFLYDVVRPNLYHG 69
Query: 323 VEVKFISG-APXEXILLGEGXH*LERXXLSHLNQEQXNELIQXKGF 457
V V F G +P + + + +S + ++ + ++ KGF
Sbjct: 70 VTVDFTPGRSPAAYLYDADNQLVDDGYDVSGMKFDELHTFVRSKGF 115
>UniRef50_A5N9K8 Cluster: Putative uncharacterized protein; n=1;
Shewanella baltica OS223|Rep: Putative uncharacterized
protein - Shewanella baltica OS223
Length = 423
Score = 36.3 bits (80), Expect = 1.7
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 53 LGVXKIITPXGXCSPXKY*FVXQLXKCKF-LFRMKIXLLSVVXFCAVFVLSSEYELSDIV 229
LGV I+ P Y + ++ K + L +K+ L+SV F++ ++ E DI+
Sbjct: 298 LGVCSIVGIESLTEPQSYGYFNEVAKFDYNLKSIKLPLISVESLILKFIMMTQQEKRDII 357
Query: 230 SXRIESCRGCSL 265
S I SC S+
Sbjct: 358 SGHIASCHEFSM 369
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,355,368
Number of Sequences: 1657284
Number of extensions: 4299340
Number of successful extensions: 7757
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7756
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 129579762880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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