Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_O22
(1305 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 387 e-107
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 387 e-107
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 206 2e-85
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 266 2e-71
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 200 2e-51
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 200 2e-51
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 181 1e-45
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 103 3e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 83 4e-16
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 83 4e-16
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 78 2e-14
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 78 2e-14
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 78 2e-14
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 6e-06
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.004
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.007
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.012
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 36 0.063
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 33 0.34
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.34
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 5.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 5.5
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 9.5
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 387 bits (952), Expect = e-107
Identities = 193/273 (70%), Positives = 201/273 (73%)
Frame = +2
Query: 113 MGKEXXXXXXXXXXXXXSGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 292
MGKE SGKST GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 293 DKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGT 472
DKLKAERERGITIDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 473 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 652
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 653 IGXXPXXVXFVPISGWXGXXMLEPSXKMPWFKGWXVERKEGKXXGKXLIEXLXXXXXXXR 832
IG P V FVPISG+ G MLE S MPWFKGW VERKEG GK L+E L R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 833 XXXXXXXXXXXXVXKXXGIGXVXVXXXXXGVXK 931
V K GIG V V G+ K
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 273
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 387 bits (952), Expect = e-107
Identities = 193/273 (70%), Positives = 201/273 (73%)
Frame = +2
Query: 113 MGKEXXXXXXXXXXXXXSGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 292
MGKE SGKST GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 293 DKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGT 472
DKLKAERERGITIDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 473 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 652
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 653 IGXXPXXVXFVPISGWXGXXMLEPSXKMPWFKGWXVERKEGKXXGKXLIEXLXXXXXXXR 832
IG P V FVPISG+ G MLE S MPWFKGW VERKEG GK L+E L R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 833 XXXXXXXXXXXXVXKXXGIGXVXVXXXXXGVXK 931
V K GIG V V G+ K
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIK 273
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 206 bits (504), Expect(2) = 2e-85
Identities = 98/117 (83%), Positives = 101/117 (86%)
Frame = +2
Query: 113 MGKEXXXXXXXXXXXXXSGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 292
MGKE SGKST GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 293 DKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVA 463
DKLKAERERGITIDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 128 bits (309), Expect(2) = 2e-85
Identities = 66/126 (52%), Positives = 72/126 (57%)
Frame = +2
Query: 554 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGXXPXXVXFVPISGWXGXXMLEPSXK 733
L+V NKMDSTEPP+SE RF EI EVS +IKKIG P V FVPISG+ G MLE S
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 734 MPWFKGWXVERKEGKXXGKXLIEXLXXXXXXXRXXXXXXXXXXXXVXKXXGIGXVXVXXX 913
MPWFKGW VERKEG GK L+E L R V K GIG V V
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 914 XXGVXK 931
G+ K
Sbjct: 234 ETGIIK 239
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 266 bits (653), Expect = 2e-71
Identities = 133/172 (77%), Positives = 140/172 (81%)
Frame = +2
Query: 113 MGKEXXXXXXXXXXXXXSGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 292
MGKE SGKST GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 293 DKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGT 472
DKLKAERERGITIDIALWKFET+KYY+TIIDA GHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 473 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 628
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +3
Query: 618 KSRRKYPHTSRRLXXXXXXSXSCPFLDGTXTXCWSLQXKCLGSRDGRWSVRKXXXXENXS 797
+S + P +SRR D T T C C GSRDG + RK E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 200 bits (488), Expect = 2e-51
Identities = 98/196 (50%), Positives = 134/196 (68%)
Frame = +2
Query: 164 SGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 343
+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI
Sbjct: 181 AGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGR 240
Query: 344 WKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 523
FETS + ++DA GH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHA
Sbjct: 241 TSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHA 300
Query: 524 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGXXPXXVXFVPISGWX 703
LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ + FVP+SG+
Sbjct: 301 LLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP-KFVPVSGFT 357
Query: 704 GXXMLEPSXKMPWFKG 751
G +++ ++ W+ G
Sbjct: 358 GENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 200 bits (488), Expect = 2e-51
Identities = 98/196 (50%), Positives = 134/196 (68%)
Frame = +2
Query: 164 SGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 343
+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI
Sbjct: 199 AGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGR 258
Query: 344 WKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 523
FETS + ++DA GH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHA
Sbjct: 259 TSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHA 318
Query: 524 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGXXPXXVXFVPISGWX 703
LL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ + FVP+SG+
Sbjct: 319 LLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP-KFVPVSGFT 375
Query: 704 GXXMLEPSXKMPWFKG 751
G +++ ++ W+ G
Sbjct: 376 GENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 181 bits (440), Expect = 1e-45
Identities = 83/182 (45%), Positives = 124/182 (68%), Gaps = 1/182 (0%)
Frame = +2
Query: 164 SGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 343
+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++
Sbjct: 120 AGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGR 179
Query: 344 WKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 523
FET K + TI+DA GH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH+
Sbjct: 180 AYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHS 239
Query: 524 LLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGXXP-XXVXFVPISGW 700
+L T GVK L++ VNKMD + E RF+EI+ +++ +++K+G P + +VP SG
Sbjct: 240 MLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGL 299
Query: 701 XG 706
G
Sbjct: 300 TG 301
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 103 bits (247), Expect = 3e-22
Identities = 49/67 (73%), Positives = 50/67 (74%)
Frame = +2
Query: 113 MGKEXXXXXXXXXXXXXSGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 292
MGKE SGKST GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 293 DKLKAER 313
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 83.0 bits (196), Expect = 4e-16
Identities = 46/100 (46%), Positives = 62/100 (62%)
Frame = +2
Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAG 469
+DK K E++RGITI++A +E+ + D GH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 470 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 589
G E QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 83.0 bits (196), Expect = 4e-16
Identities = 46/100 (46%), Positives = 62/100 (62%)
Frame = +2
Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAG 469
+DK K E++RGITI++A +E+ + D GH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 470 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 589
G E QT+EH +LA +GVK + + +NK D E
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 77.8 bits (183), Expect = 2e-14
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +2
Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAG 469
+D E+ RGITI+ ++ET+K + ID GH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 470 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 643
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 644 IKKIG 658
+ + G
Sbjct: 197 LNEFG 201
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 77.8 bits (183), Expect = 2e-14
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +2
Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAG 469
+D E+ RGITI+ ++ET+K + ID GH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 470 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 643
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 644 IKKIG 658
+ + G
Sbjct: 198 LNEFG 202
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 77.8 bits (183), Expect = 2e-14
Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 2/125 (1%)
Frame = +2
Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAG 469
+D E+ RGITI+ ++ET+K + ID GH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 470 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 643
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 644 IKKIG 658
+ + G
Sbjct: 198 LNEFG 202
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 49.2 bits (112), Expect = 6e-06
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = +2
Query: 287 VLDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAA 466
+LDKL+ ERERGIT+ Y + +ID GH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 467 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 580
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 39.9 bits (89), Expect = 0.004
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +2
Query: 260 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDALGHRDFIKNMITGTSQ 436
GK + A ++ A GIT I + E +K VT +D GH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 437 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 580
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.1 bits (87), Expect = 0.007
Identities = 41/139 (29%), Positives = 57/139 (41%)
Frame = +2
Query: 164 SGKSTXXGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIAL 343
SGK+T ++Y G ID E+ +G +D + ER+RGITI A
Sbjct: 55 SGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQRGITIQSAA 104
Query: 344 WKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHA 523
+ + IID GH DF + D AVL++ G G G+ T
Sbjct: 105 TYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQ 159
Query: 524 LLAFTLGVKQLIVGVNKMD 580
L + + I VNKMD
Sbjct: 160 LARYNV---PFICFVNKMD 175
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.3 bits (85), Expect = 0.012
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +2
Query: 371 VTIIDALGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 550
+ +ID GH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 551 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 658
++I+ +NK D E + + E K+V +K +G
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 35.9 bits (79), Expect = 0.063
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +2
Query: 287 VLDKLKAERERGITIDIALWKFETSKYYVTIIDALGHRDFIKNMITGTSQADCAVLIVAA 466
V D L ERERGIT+ A + + + +ID GH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 467 GTG 475
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.5 bits (73), Expect = 0.34
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +2
Query: 368 YVTIIDALGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 547
+V+ +D GH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 548 KQLIVGVNKMDSTEPPYSEPRFEEI 622
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.34
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 573 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 445
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 215 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 316
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 215 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 316
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.5
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 556 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 398
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 397 VSKSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 278
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,036,460
Number of Sequences: 27780
Number of extensions: 321931
Number of successful extensions: 797
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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