Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_O19
         (1313 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.40 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.8  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   4.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   6.5  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   6.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   8.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.7 bits (61), Expect = 0.40
 Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
 Frame = -2

Query: 556 PPPPXGGGXXXXXKKXXXPPPPXXXXPATAXXPXXXXRPXXGGG-XXXXXPPXPPQKKTF 380
           PPPP GG       +   PP      P     P     P           PP PP     
Sbjct: 532 PPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPM 591

Query: 379 YPPP 368
            PPP
Sbjct: 592 GPPP 595


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 17/55 (30%), Positives = 19/55 (34%)
 Frame = +2

Query: 395 GGXGGXXGXXSPPLGGAXXVXGXXRGCWXXGXGGGGGXXFFXXXXXPPXXGGGGG 559
           GG GG  G  +   GG   + G        G GG GG              GGGG
Sbjct: 812 GGNGGGGGAGAS--GGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGG 864


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +2

Query: 437 GGAXXVXGXXRGCWXXGXGGGG 502
           GG     G   GC   G GGGG
Sbjct: 184 GGELTTGGGTNGCTKAGGGGGG 205


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 13/39 (33%), Positives = 14/39 (35%)
 Frame = +2

Query: 470 GCWXXGXGGGGGXXFFXXXXXPPXXGGGGGXXFXGXPPP 586
           G    G GGG G         PP  G  GG  +   P P
Sbjct: 121 GATAGGGGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVP 159


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 21/90 (23%), Positives = 22/90 (24%), Gaps = 2/90 (2%)
 Frame = -1

Query: 689 PPRPXXGXXPPPPPXGG--XXXPXXXPXXXXXXXGXXXGGXQXXXXPPPPRGXGXXXXXK 516
           PPR      P PP  GG     P                G Q    P PP   G      
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPM 259

Query: 515 KXXXPPPPPXXXTSNRXXAPXPXSPXXGGG 426
               PP  P            P +    GG
Sbjct: 260 MGQPPPIRPPNPMGGPRPQISPQNSNLSGG 289


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 8.5
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +2

Query: 485 GXGGGGGXXFFXXXXXPPXXGGGGG 559
           G GGGGG             GGGGG
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGG 681


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,542
Number of Sequences: 2352
Number of extensions: 11736
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 151645137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)