Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_O16
         (1295 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        26   0.62 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        26   0.62 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        26   0.62 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   0.82 
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    24   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   4.4  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   5.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 764 NDLLSANAKEIEELNKIWNKGNEY 835
           N L    AK++  +NK WNK N++
Sbjct: 679 NLLFKDEAKDLVSVNKSWNKWNDW 702


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 764 NDLLSANAKEIEELNKIWNKGNEY 835
           N L    AK++  +NK WNK N++
Sbjct: 679 NLLFKDEAKDLVSVNKSWNKWNDW 702


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 764 NDLLSANAKEIEELNKIWNKGNEY 835
           N L    AK++  +NK WNK N++
Sbjct: 679 NLLFKDEAKDLVSVNKSWNKWNDW 702


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +2

Query: 434 GIAATTLALCDLVFASENSYFYTPFTKLG 520
           GI   +  +CD+ + + N++ +TPF + G
Sbjct: 53  GINWRSYVVCDVAYNNVNNWLWTPFIERG 81


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 746 LRNSYHNDLLSANAKEIEELNKIWNKGNEYILEVFNKKS 862
           L+ S  +   S  A  IE+   IW+  + YI +V NKK+
Sbjct: 296 LQTSIMSRHYSTRAIVIEKGQSIWDYDSTYIPKVKNKKA 334


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 332 QELL*SHCHYYNNHPHLLRLSLIYFHR 252
           QE L  H H  N+H HL   ++   HR
Sbjct: 135 QETLQRHHHLQNHHHHLQSTAVQDHHR 161


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 719 HSLTITKKLLRNSYHNDLL 775
           H++T+  KLLR S   D+L
Sbjct: 133 HTITVPNKLLRISQDGDIL 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,177
Number of Sequences: 438
Number of extensions: 6070
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44543373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)