Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_O15
(1231 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 46 8e-05
04_04_0819 - 28312667-28313219,28315157-28316430 41 0.002
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 39 0.007
02_05_0264 + 27263562-27264830 39 0.007
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 39 0.007
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 38 0.012
11_03_0157 + 10897769-10898066,10898308-10899461 37 0.028
06_03_0915 - 25929433-25930893 32 1.1
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106... 32 1.1
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 31 1.4
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 29 9.9
01_05_0586 + 23443371-23444645 29 9.9
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 45.6 bits (103), Expect = 8e-05
Identities = 31/128 (24%), Positives = 53/128 (41%)
Frame = +2
Query: 638 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEK 817
T+ +++ +GTG+L +P AF+ AG + G G +CM +LV C +L EK
Sbjct: 33 TLGNVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCMLLLVDCRDKL---EEK 89
Query: 818 PALSFSEVIEDSFLSGPIVFRPYAKKMRALVNIFLVITXLGFGXVYFXXXATNLQDTXHL 997
+ E + G + + + R L I ++++ G Y NL
Sbjct: 90 ES---EETYHGHYTYGDLGEKCFGTIGRCLTEILILVSQAGGSVAYLIFIGQNLHSVFSQ 146
Query: 998 FRINLAYI 1021
A+I
Sbjct: 147 LMSPAAFI 154
>04_04_0819 - 28312667-28313219,28315157-28316430
Length = 608
Score = 41.1 bits (92), Expect = 0.002
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 665 IGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEKPALSFSEV 841
+G+G+L +P F G + G L + A+ HCM +LV C L K A SF ++
Sbjct: 49 VGSGVLGLPYTFSRTGWVAGSVLLLAVAALTFHCMMLLVACRRRLAYDHPKIA-SFGDL 106
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 39.1 bits (87), Expect = 0.007
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 638 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHEL 799
T+ +++ +GTG+L +P AF+ +G + G GA +CM +L+ C +L
Sbjct: 21 TLGNIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLLDCRDKL 74
>02_05_0264 + 27263562-27264830
Length = 422
Score = 39.1 bits (87), Expect = 0.007
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +2
Query: 665 IGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEKPALSFSEVI 844
+G G+L +P F G G L + A+ +CM +LV C L E P ++ +
Sbjct: 47 VGAGVLGLPYTFSRTGWAAGSILLLSVAALTFYCMMLLVACRRRLA--DEHPKIASFGDL 104
Query: 845 EDSFLSGP 868
D+ GP
Sbjct: 105 GDAVFRGP 112
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 39.1 bits (87), Expect = 0.007
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 665 IGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHE 796
+G GI+A+P + K G+I G+ +++ + + +LV+CSHE
Sbjct: 56 VGAGIMALPASIKMLGIIPGILMIILVALLTEASIDMLVRCSHE 99
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 38.3 bits (85), Expect = 0.012
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 665 IGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHE 796
+G GI+A+P + K G+I G+ +++ + + +LV+CSH+
Sbjct: 96 VGAGIMALPASIKMLGIIPGILMIIVVALLTEASIDMLVRCSHQ 139
>11_03_0157 + 10897769-10898066,10898308-10899461
Length = 483
Score = 37.1 bits (82), Expect = 0.028
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 620 PTSNF-DTMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQC 787
PTS+F ++I+++ IG G L+ P A +N G VF + +G MC + H++ +C
Sbjct: 83 PTSSFAHSVINMVGMLIGLGQLSTPYALENGGWA-SVFLLVGLGVMCAYTAHLIGKC 138
>06_03_0915 - 25929433-25930893
Length = 486
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 641 MIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQ 784
+ +L IG GI+A+P K G+ G+ L+MG + + +LV+
Sbjct: 80 VFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVR 127
>04_04_0338 +
24509698-24510042,24510373-24510490,24510539-24510642,
24510823-24511491
Length = 411
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 647 HLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQC 787
H++ IG+G+L++ G + G L+ GA+ C +LV+C
Sbjct: 42 HIITAVIGSGVLSLAWGVAQLGWVAGPAVMLLFGAVIYCCSVLLVEC 88
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 31.5 bits (68), Expect = 1.4
Identities = 26/110 (23%), Positives = 49/110 (44%)
Frame = +2
Query: 527 QSTEPVINDDGPSTEKTKGDYCPASERCLEYPTSNFDTMIHLLKGNIGTGILAMPDAFKN 706
+ +EP++ P ++ GD AS S + +L +G GI+A+P K
Sbjct: 8 EGSEPLL----PRKQRDGGDDGAASSHDHFDGASFSGAVFNLSTTIVGAGIMALPATMKV 63
Query: 707 AGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEKPALSFSEVIEDSF 856
GL+ G+ ++ + + +LV+ S + A S+ E + D+F
Sbjct: 64 LGLVPGLILVMLAAVLTDASIELLVRFSRAV------GATSYGEAMGDAF 107
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 28.7 bits (61), Expect = 9.9
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 665 IGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEKP--ALSFSE 838
+G GI+A+P K GL G+ L+ +L S EL +RS + A S+
Sbjct: 43 VGAGIMALPATMKVLGLAPGLVAILLAA--------LLTDASIELLVRSSRAAGAPSYGA 94
Query: 839 VIEDSF 856
V+ D+F
Sbjct: 95 VMGDAF 100
>01_05_0586 + 23443371-23444645
Length = 424
Score = 28.7 bits (61), Expect = 9.9
Identities = 17/73 (23%), Positives = 38/73 (52%)
Frame = +2
Query: 638 TMIHLLKGNIGTGILAMPDAFKNAGLIFGVFCTLIMGAMCTHCMHILVQCSHELCIRSEK 817
T ++L G G+L+MP A G + + +++GA+C + ++ E C+R++
Sbjct: 42 TCLNLTNAVSGIGVLSMPYAVSQGGWL-SLLLFVLVGAVCYYTGTLI-----ERCMRADG 95
Query: 818 PALSFSEVIEDSF 856
S+ ++ + +F
Sbjct: 96 SIASYPDIGQYAF 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,757,638
Number of Sequences: 37544
Number of extensions: 459523
Number of successful extensions: 899
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3782886900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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