Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_O10
         (1311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096756-1|AAH96756.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
BC071940-1|AAH71940.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
BC068055-1|AAH68055.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
BC007857-1|AAH07857.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
BC007434-1|AAH07434.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
BC007410-1|AAH07410.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
BC000802-1|AAH00802.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
AB061839-1|BAB79477.1|  194|Homo sapiens ribosomal protein S9 pr...   328   3e-89
U14971-1|AAA85659.1|  194|Homo sapiens ribosomal protein S9 prot...   322   2e-87
AL080243-1|CAB62915.1|  194|Homo sapiens protein ( Human DNA seq...   310   6e-84
BC141920-1|AAI41921.1|  113|Homo sapiens RPS9 protein protein.        196   1e-49
AB007150-1|BAA25816.1|   64|Homo sapiens ribosomal protein S9 pr...   124   1e-27
BC011745-1|AAH11745.1|  184|Homo sapiens IMP3, U3 small nucleola...    58   5e-08
BC006487-1|AAH06487.1|  184|Homo sapiens IMP3, U3 small nucleola...    58   5e-08
AY050497-1|AAL06639.1|  184|Homo sapiens BRMS2 protein.                58   5e-08
AK223121-1|BAD96841.1|  184|Homo sapiens U3 snoRNP protein 3 hom...    58   5e-08
AK001830-1|BAA91929.1|  184|Homo sapiens protein ( Homo sapiens ...    58   5e-08
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf...    31   7.0  
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr...    31   7.0  
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr...    31   7.0  
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.              31   7.0  

>BC096756-1|AAH96756.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>BC071940-1|AAH71940.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>BC068055-1|AAH68055.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>BC007857-1|AAH07857.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>BC007434-1|AAH07434.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>BC007410-1|AAH07410.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>BC000802-1|AAH00802.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>AB061839-1|BAB79477.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  328 bits (806), Expect = 3e-89
 Identities = 156/175 (89%), Positives = 168/175 (96%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQ 182


>U14971-1|AAA85659.1|  194|Homo sapiens ribosomal protein S9
           protein.
          Length = 194

 Score =  322 bits (790), Expect = 2e-87
 Identities = 154/175 (88%), Positives = 166/175 (94%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8   VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQ 182


>AL080243-1|CAB62915.1|  194|Homo sapiens protein ( Human DNA
           sequence from clone RP11-12M9 on chromosome 22. ).
          Length = 194

 Score =  310 bits (762), Expect = 6e-84
 Identities = 150/175 (85%), Positives = 162/175 (92%)
 Frame = +1

Query: 112 VFSKTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 291
           V  KTYVTPRR FEK+RLDQEL +I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8   VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67

Query: 292 PKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHAR 471
           P+RLFEGNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR
Sbjct: 68  PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127

Query: 472 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKGQ 636
           +LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRPGRVKRKN +KGQ
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQ 182


>BC141920-1|AAI41921.1|  113|Homo sapiens RPS9 protein protein.
          Length = 113

 Score =  196 bits (478), Expect = 1e-49
 Identities = 93/103 (90%), Positives = 100/103 (97%)
 Frame = +1

Query: 286 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 465
           +DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5   EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64

Query: 466 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 594
           AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65  ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107


>AB007150-1|BAA25816.1|   64|Homo sapiens ribosomal protein S9
           protein.
          Length = 64

 Score =  124 bits (298), Expect = 1e-27
 Identities = 56/63 (88%), Positives = 62/63 (98%)
 Frame = +1

Query: 121 KTYVTPRRPFEKARLDQELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 300
           KTYVTPRRPFEK+RLDQEL +IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2   KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61

Query: 301 LFE 309
           LFE
Sbjct: 62  LFE 64


>BC011745-1|AAH11745.1|  184|Homo sapiens IMP3, U3 small nucleolar
           ribonucleoprotein, homolog (yeast) protein.
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = +1

Query: 172 ELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 351
           EL ++  Y L+ + +  R       +R+ AR L  L E+D  R+    ALL +L  +G++
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 352 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 531
             +   L+    +    F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F
Sbjct: 90  PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 532 IV 537
           +V
Sbjct: 149 LV 150


>BC006487-1|AAH06487.1|  184|Homo sapiens IMP3, U3 small nucleolar
           ribonucleoprotein, homolog (yeast) protein.
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = +1

Query: 172 ELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 351
           EL ++  Y L+ + +  R       +R+ AR L  L E+D  R+    ALL +L  +G++
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 352 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 531
             +   L+    +    F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F
Sbjct: 90  PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 532 IV 537
           +V
Sbjct: 149 LV 150


>AY050497-1|AAL06639.1|  184|Homo sapiens BRMS2 protein.
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = +1

Query: 172 ELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 351
           EL ++  Y L+ + +  R       +R+ AR L  L E+D  R+    ALL +L  +G++
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 352 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 531
             +   L+    +    F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F
Sbjct: 90  PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 532 IV 537
           +V
Sbjct: 149 LV 150


>AK223121-1|BAD96841.1|  184|Homo sapiens U3 snoRNP protein 3
           homolog protein.
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = +1

Query: 172 ELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 351
           EL ++  Y L+ + +  R       +R+ AR L  L E+D  R+    ALL +L  +G++
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 352 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 531
             +   L+    +    F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F
Sbjct: 90  PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 532 IV 537
           +V
Sbjct: 149 LV 150


>AK001830-1|BAA91929.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10968 fis, clone PLACE1000863, moderately
           similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
           YHR148W. ).
          Length = 184

 Score = 58.4 bits (135), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 60/122 (49%)
 Frame = +1

Query: 172 ELXIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 351
           EL ++  Y L+ + +  R       +R+ AR L  L E+D  R+    ALL +L  +G++
Sbjct: 30  ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89

Query: 352 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 531
             +   L+    +    F  RRL T + K  +A+ +  A   + Q H+RV   VV  P+F
Sbjct: 90  PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148

Query: 532 IV 537
           +V
Sbjct: 149 LV 150


>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
            A protein.
          Length = 2595

 Score = 31.5 bits (68), Expect = 7.0
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -3

Query: 310  LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SXTLGQDVP---F 152
            LRT  W P P    +H Q YG    Y +  I RAI+    G  +   +  + Q +P   F
Sbjct: 998  LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQV-QAIPYPCF 1056

Query: 151  QKDDEVSRTSLKIPTVL 101
             KD+ ++  S  +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073


>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
           transporter family A member 12 protein.
          Length = 2277

 Score = 31.5 bits (68), Expect = 7.0
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -3

Query: 310 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SXTLGQDVP---F 152
           LRT  W P P    +H Q YG    Y +  I RAI+    G  +   +  + Q +P   F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQV-QAIPYPCF 738

Query: 151 QKDDEVSRTSLKIPTVL 101
            KD+ ++  S  +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755


>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
           transporter family A member 12 protein.
          Length = 2347

 Score = 31.5 bits (68), Expect = 7.0
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -3

Query: 310 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SXTLGQDVP---F 152
           LRT  W P P    +H Q YG    Y +  I RAI+    G  +   +  + Q +P   F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQV-QAIPYPCF 808

Query: 151 QKDDEVSRTSLKIPTVL 101
            KD+ ++  S  +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825


>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
          Length = 2413

 Score = 31.5 bits (68), Expect = 7.0
 Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
 Frame = -3

Query: 310  LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SXTLGQDVP---F 152
            LRT  W P P    +H Q YG    Y +  I RAI+    G  +   +  + Q +P   F
Sbjct: 998  LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTGRNSQEIAVQV-QAIPYPCF 1056

Query: 151  QKDDEVSRTSLKIPTVL 101
             KD+ ++  S  +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,608,046
Number of Sequences: 237096
Number of extensions: 2708950
Number of successful extensions: 6040
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6035
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18935903120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)