Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_O06
(1337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 39 0.007
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.46
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.46
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.46
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 33 0.60
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 33 0.60
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 0.80
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 32 1.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 32 1.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 2.4
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 4.3
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.6
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 29 5.6
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.6
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 9.8
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 9.8
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 39.1 bits (87), Expect = 0.007
Identities = 44/175 (25%), Positives = 49/175 (28%), Gaps = 13/175 (7%)
Frame = +1
Query: 433 GFWXPXPFPXXXTPGPXXXGGGKGXXPXXGGKXXSPKXXGXXXKKXXXKXXKXGXXPQKG 612
GF P F GP GG + +P G + PQ G
Sbjct: 286 GFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQ---GPPQGG 342
Query: 613 XXGGXFPXXPPPXKXXKKXXPQXXGGKPXXXXKXXXXXXXXXXXXXXXXXXRXXXENXSP 792
G F PP + PQ GG P +P
Sbjct: 343 PPQGSF--GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAP 400
Query: 793 XXPWGKGGXFXKPXXG-----------GFPXGXGPPPXGGXG--XXPPLXXPPRG 918
P G GG P G G P G GPPP GG G PP PP G
Sbjct: 401 QGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVG 455
Score = 37.9 bits (84), Expect = 0.016
Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 820 FXKPXXGGFPXGXGPPPXGGXGXXPPLXXPPRGPLXGKXXXGXPXXEKXKIF--PPWGXP 993
F P G P G GPPP GG G P PP+G G G P + PP G P
Sbjct: 397 FGAPQGPGGPGGYGPPPPGGPG-APGSYGPPQG---GPGGFGPPPPGGPGAYGPPPTGFP 452
Query: 994 P 996
P
Sbjct: 453 P 453
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -3
Query: 549 PXFXGXPFXPXG-GXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXGXF 400
P G P P G G PP PGA G G + P PGG G +
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.46
Identities = 26/83 (31%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Frame = +1
Query: 853 GXGPPPXGGXGXXPPLXXPPRGPLXGK---XXXGXPXXEKXKIFPPWGXPPXXXXXXXXR 1023
G PPP G PP PP P G G P PP G PP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP----PPRGSPPTGSLPPPQ- 316
Query: 1024 XFXGGXXKXFXXGGPNPPXXQKK 1092
GG G P PP QK+
Sbjct: 317 --AGGSPPPAGTGSPPPPPRQKR 337
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -1
Query: 524 PPLXGXX-PXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPPPP 369
PPL G P PPP P G +P P GG + PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.46
Identities = 26/83 (31%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Frame = +1
Query: 853 GXGPPPXGGXGXXPPLXXPPRGPLXGK---XXXGXPXXEKXKIFPPWGXPPXXXXXXXXR 1023
G PPP G PP PP P G G P PP G PP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP----PPRGSPPTGSLPPPQ- 337
Query: 1024 XFXGGXXKXFXXGGPNPPXXQKK 1092
GG G P PP QK+
Sbjct: 338 --AGGSPPPAGTGSPPPPPRQKR 358
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -1
Query: 524 PPLXGXX-PXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPPPP 369
PPL G P PPP P G +P P GG + PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.46
Identities = 26/83 (31%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Frame = +1
Query: 853 GXGPPPXGGXGXXPPLXXPPRGPLXGK---XXXGXPXXEKXKIFPPWGXPPXXXXXXXXR 1023
G PPP G PP PP P G G P PP G PP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP----PPRGSPPTGSLPPPQ- 322
Query: 1024 XFXGGXXKXFXXGGPNPPXXQKK 1092
GG G P PP QK+
Sbjct: 323 --AGGSPPPAGTGSPPPPPRQKR 343
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = -1
Query: 524 PPLXGXX-PXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPPPP 369
PPL G P PPP P G +P P GG + PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 32.7 bits (71), Expect = 0.60
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +1
Query: 790 PXXPWGKGGXFXKPXXGGFPXGXGPP-PXGGXGXXPPLXXPPRGPLXGKXXXGXPXXEKX 966
P P G GG G P GPP P G P PP+ P G P +
Sbjct: 157 PPGPAGDGGRDGADGVDGTPGEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPG 216
Query: 967 KIFPPWGXP 993
PP G P
Sbjct: 217 PDGPP-GAP 224
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 32.7 bits (71), Expect = 0.60
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = +1
Query: 790 PXXPWGKGGXFXKPXXGGFPXGXGPP-PXGGXGXXPPLXXPPRGPLXGKXXXGXPXXEKX 966
P P G GG G P GPP P G P PP+ P G P +
Sbjct: 138 PPGPAGDGGRDGADGVDGTPGEIGPPGPPAPPGPDPHSLFPPQCPCEAPPGDGGPPGQPG 197
Query: 967 KIFPPWGXP 993
PP G P
Sbjct: 198 PDGPP-GAP 205
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 0.80
Identities = 46/171 (26%), Positives = 47/171 (27%), Gaps = 4/171 (2%)
Frame = +1
Query: 820 FXKPXXGGFPXGXGPPPXGGXGXXPPLXXPPR--GPLXGKXXXGXPXXEKXKIFPPWGXP 993
F K G P GPP PP PP P G P PP G P
Sbjct: 137 FGKHHSTGAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGP 196
Query: 994 PXXXXXXXXRXFXGGXXKXFXXGGPNPPXXQKKXXFLGXXPXXNPNXXGKKXWXXFXPXK 1173
P GG F G PP F P P G F P
Sbjct: 197 PGPFNPSEAPP-SGGPTGPFDPSGA-PPSGGPPGPF---NPSGAPPSGGPP--GPFDPSG 249
Query: 1174 KXPGGG--GXFFXXXPXXPPKKXXXKTLFFFXGAPXXKKPXGGWXKKKXPP 1320
P GG G F P P F GAP P G + PP
Sbjct: 250 APPSGGPPGPF---NPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPP 297
Score = 31.1 bits (67), Expect = 1.8
Identities = 45/170 (26%), Positives = 47/170 (27%), Gaps = 9/170 (5%)
Frame = +1
Query: 838 GGFPXGXGPPPXGGXGXXPPLXXPPRG-------PLXGKXXXGXPXXEKXKIFPPWGXPP 996
G F PP G G P PP G P + G P PP G PP
Sbjct: 273 GPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPP 332
Query: 997 XXXXXXXXRXFXGGXXKXFXXGGPNPPXXQKKXXFLGXXPXXNPNXXGKKXWXXFXPXKK 1176
GG F G PP F P P G F P
Sbjct: 333 GPFDPSGAPP-SGGPPGPFNPSGA-PPSGGPPGPF---DPSGAPPSGGPP--GPFDPSGA 385
Query: 1177 XPGGG--GXFFXXXPXXPPKKXXXKTLFFFXGAPXXKKPXGGWXKKKXPP 1320
P GG G F P P F GAP P G + PP
Sbjct: 386 PPSGGPPGPF---DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPP 432
Score = 30.3 bits (65), Expect = 3.2
Identities = 46/176 (26%), Positives = 47/176 (26%), Gaps = 6/176 (3%)
Frame = +1
Query: 811 GGXFXKPXXGGFPXGXGPPPXGGXGXXPPLXXPPR--GPLXGKXXXGXPXXEKXKIFPPW 984
GG G P GPP PP PP P G P PP
Sbjct: 209 GGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS 268
Query: 985 GXPPXXXXXXXXRXFXGGXXKXFXXGGPNPPXXQKKXXF--LGXXPXXNPNXXGKKXWXX 1158
G PP GG F G PP F G P P
Sbjct: 269 GGPPGPFDPSGAPP-SGGPPGPFDPSGA-PPSGGPPGPFDPSGAQPSGGPP-------GP 319
Query: 1159 FXPXKKXPGGG--GXFFXXXPXXPPKKXXXKTLFFFXGAPXXKKPXGGWXKKKXPP 1320
F P P GG G F P P F GAP P G + PP
Sbjct: 320 FNPSGAPPSGGPPGPF---DPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 372
Score = 29.1 bits (62), Expect = 7.4
Identities = 48/213 (22%), Positives = 49/213 (23%), Gaps = 4/213 (1%)
Frame = +1
Query: 370 GGGGXXFXXXKXPPXPGXXGFGFWXPXPFPXXXTPGPXXXGGG--KGXXPXXGGKXXSPK 543
GG F PP G G F P PGP G G P +P
Sbjct: 314 GGPPGPFNPSGAPPSGGPPG-PFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 372
Query: 544 XXGXXXKKXXXKXXKXGXXPQKGXXGGXFPXXPPPXKXXKKXXPQXXGGKPXXXXKXXXX 723
G G P G P PP P GG P
Sbjct: 373 SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPS-GGPPGPFNPSGAP 431
Query: 724 XXXXXXXXXXXXXXRXXXENXSPXXPWGKGGXFXKPXXGGFPXGXGPPPXGGXGXXPPLX 903
P P G P G F PP G G P
Sbjct: 432 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPP--GPFNPSGAPPSGGPPGPFDPSG 489
Query: 904 XPPRGPLXG--KXXXGXPXXEKXKIFPPWGXPP 996
PP G G P F P G PP
Sbjct: 490 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPP 522
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 790 PXXPWGKGGXFXKPXXGGFPXGXGPPPXGGXGXXPPLXXPPRGP 921
P P G G P G P G P GG P PP GP
Sbjct: 170 PPGPAGPAGNAGPPGAPGGPGAPGNTPSGGAAGPPGPPGPPGGP 213
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +1
Query: 799 PWGKGGXFXKPXXGGFPXGXGPPPXGGXGXXPPLXXPPRGP 921
P G GG P GG GPP GG G PP P GP
Sbjct: 174 PPGHGGMGGPPGHGG---QGGPPGHGGMGGPPPGQGGPGGP 211
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.9 bits (69), Expect = 1.1
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +1
Query: 799 PWGKGGXFXKPXXGGFPXGXGPPPXGGXGXXPPLXXPPRGP 921
P G GG P GG GPP GG G PP P GP
Sbjct: 454 PPGHGGMGGPPGHGG---QGGPPGHGGMGGPPPGQGGPGGP 491
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +1
Query: 811 GGXFXKPXXGGFPX---GXGPPPXGGXGXXPPLXXPPRGPLXGKXXXGXPXXEKXKIFPP 981
GG P GG P G PPP G PP PP G G G P +F P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG----GPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = -1
Query: 539 GEXXXPPLXGXXPXPP---PXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPPPP 369
G PP+ G P PP P GP G P P G PPPP
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +1
Query: 790 PXXPWGKGGXFXKPXXGGFPXG-XGPPPXGGXGXXPPLXXPPRGP 921
P P GG P GG P GPPP G PP+ P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = -1
Query: 524 PPLXGXXPXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPP---PPRXXKK 354
PP+ G P PPP G G K P P G F P PP+ K
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Query: 353 KXXP 342
P
Sbjct: 812 VDGP 815
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +1
Query: 811 GGXFXKPXXGGFPX---GXGPPPXGGXGXXPPLXXPPRGPLXGKXXXGXPXXEKXKIFPP 981
GG P GG P G PPP G PP PP G G G P +F P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG----GPPPPPPPGMFAP 795
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = -1
Query: 539 GEXXXPPLXGXXPXPP---PXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPPPP 369
G PP+ G P PP P GP G P P G PPPP
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +1
Query: 790 PXXPWGKGGXFXKPXXGGFPXG-XGPPPXGGXGXXPPLXXPPRGP 921
P P GG P GG P GPPP G PP+ P P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = -1
Query: 524 PPLXGXXPXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPP---PPRXXKK 354
PP+ G P PPP G G K P P G F P PP+ K
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 811
Query: 353 KXXP 342
P
Sbjct: 812 VDGP 815
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 2.4
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = +1
Query: 811 GGXFXKPXXGGFPX---GXGPPPXGGXGXXPPLXXPPRGPLXGKXXXGXPXXEKXKIFPP 981
GG P GG P G PPP G PP PP G G G P +F P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG----GPPPPPPPGMFAP 378
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/60 (30%), Positives = 19/60 (31%), Gaps = 3/60 (5%)
Frame = -1
Query: 539 GEXXXPPLXGXXPXPP---PXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPPPP 369
G PP+ G P PP P GP G P P G PPPP
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +1
Query: 790 PXXPWGKGGXFXKPXXGGFPXG-XGPPPXGGXGXXPPLXXPPRGP 921
P P GG P GG P GPPP G PP+ P P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/64 (29%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Frame = -1
Query: 524 PPLXGXXPXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPP---PPRXXKK 354
PP+ G P PPP G G K P P G F P PP+ K
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPK 394
Query: 353 KXXP 342
P
Sbjct: 395 VDGP 398
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.9 bits (64), Expect = 4.3
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -3
Query: 516 GGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXG 406
GG + PP PG G G P +P PG G
Sbjct: 274 GGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDG 310
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = -3
Query: 537 GXPFXPXGGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXGXFXXXKXXPXPPP 367
G P P G PP PG G G P +P PG G + P PP
Sbjct: 168 GQPGAP-GDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPAGPP 223
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 531 PFXPXGGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGG 412
P P GG PP PG G G P+ P PGG
Sbjct: 148 PAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPR-GPPGPGG 186
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = -1
Query: 521 PLXGXXPXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPP 375
P+ P PPP G+ G G P P G GG PP
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 672
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = -1
Query: 521 PLXGXXPXPPPXXXGPGVXXXGKGXGXQKPNPXXPGXGGFFXXXKXXPP 375
P+ P PPP G+ G G P P G GG PP
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGGPASVLAKLPP 498
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 29.1 bits (62), Expect = 7.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 549 PXFXGXPFXPXGGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXG 406
P G P P G PP PG+ G G K +P PG G
Sbjct: 202 PAVPGPP-GPPGQAGQQGPPGPPGSNGIDGAPGAPGAKGEPGTPGEPG 248
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 522 PXGGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXG 406
P G P PG G GG P P PGG G
Sbjct: 203 PAGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPG 241
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 522 PXGGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXG 406
P G P PG G GG P P PGG G
Sbjct: 203 PSGAPGPQGPAGGPGQPGQSGGAGAPGPAGAPGAPGGPG 241
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -1
Query: 524 PPLXGXXPXPPPXXXG--PGVXXXGKGXGXQKPNPXXP 417
PP+ G P PPP P G G Q P P P
Sbjct: 98 PPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTP 135
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -3
Query: 522 PXGGXXXLXPPXXPGARGXXGGERXXXPKTKPXXPGGXG 406
P PP PGA G G + P KP PG G
Sbjct: 84 PQASNCPAGPPGPPGASGDRGLDGQPGPAGKPGQPGVAG 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.152 0.532
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,581,585
Number of Sequences: 27780
Number of extensions: 310180
Number of successful extensions: 1315
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3756810758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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