Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N24
         (1263 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    25   1.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    25   1.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    25   1.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    25   1.8  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              25   1.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    25   1.8  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   3.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   3.2  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 758 CHKSSYDATPCSKRQHGRC 814
           C+K  +  T C +R  GRC
Sbjct: 123 CYKLEHPVTGCGERTEGRC 141


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 758 CHKSSYDATPCSKRQHGRC 814
           C+K  +  T C +R  GRC
Sbjct: 128 CYKLEHPVTGCGERTEGRC 146


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 758 CHKSSYDATPCSKRQHGRC 814
           C+K  +  T C +R  GRC
Sbjct: 128 CYKLEHPVTGCGERTEGRC 146


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +2

Query: 728 YEGNCWSFRWCHKSSYDATPCSKRQHGRCFC 820
           YE +C  F  CH   +DA  C       C C
Sbjct: 739 YEAHC--FALCHCCDFDACDCEMTCPAGCKC 767


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 584 SKEYPA*MTTTVFNDPCHCCSE 519
           S+  P+  +TT F+  C+CC E
Sbjct: 75  SQVQPSVASTTGFSKECYCCRE 96


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 584 SKEYPA*MTTTVFNDPCHCCSE 519
           S+  P+  +TT F+  C+CC E
Sbjct: 75  SQVQPSVASTTGFSKECYCCRE 96


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -3

Query: 904 ALLPKTE----IINQAVKEAIRLTAVS*AESLAETSAMLPLTAWCCVIAALVAPPET 746
           ALL KT     I + A + A+R   +S A  +   +A++ L     ++  ++ PP T
Sbjct: 597 ALLTKTNRIARIFDSASRTAVRPRYISPASQVCIAAALIALQIVLTLVWMIIEPPGT 653


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -3

Query: 904 ALLPKTE----IINQAVKEAIRLTAVS*AESLAETSAMLPLTAWCCVIAALVAPPET 746
           ALL KT     I + A + A+R   +S A  +   +A++ L     ++  ++ PP T
Sbjct: 687 ALLTKTNRIARIFDSASRTAVRPRYISPASQVCIAAALIALQIVLTLVWMIIEPPGT 743


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,467
Number of Sequences: 438
Number of extensions: 5732
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43222680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)