Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_N21
(1268 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0877 + 21230447-21230815,21231855-21232208,21232417-212325... 47 9e-08
12_01_1055 - 10861665-10861829,10862827-10863171,10864374-108646... 55 1e-07
03_05_0843 + 28126480-28127007,28127092-28127457,28129388-281294... 54 3e-07
08_01_0359 + 3152483-3152857,3154493-3154855,3155133-3155211,315... 50 5e-06
01_06_1395 + 37010446-37010895 40 0.003
05_05_0038 - 21769936-21770199,21770785-21771198,21771274-217714... 38 0.022
07_03_1554 + 27659995-27660093,27661084-27661120,27661204-276612... 37 0.029
06_01_0989 + 7672764-7672904,7673017-7673067,7673176-7673296,767... 35 0.16
09_02_0480 + 9759271-9759735 34 0.21
08_02_0721 + 20401217-20401360,20401689-20401809,20401969-204020... 32 0.84
09_04_0735 - 19799648-19800012,19800452-19800536,19802087-19802173 31 2.6
12_02_0769 + 23001558-23001995 30 3.4
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 30 3.4
06_01_0117 + 912780-912959,913754-913828,914059-914112,914848-91... 30 4.5
03_02_0342 - 7645323-7645909,7646323-7646491 29 7.8
>10_08_0877 +
21230447-21230815,21231855-21232208,21232417-21232504,
21232844-21233268,21233477-21233632,21233849-21234016,
21234170-21234310,21234393-21234629,21234710-21234823,
21235096-21235272
Length = 742
Score = 46.8 bits (106), Expect(2) = 9e-08
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVLENGILSYYKSQDEV 307
GVL+KWTN GW+ RWF + G+L+Y K + V
Sbjct: 52 GVLYKWTNIGKGWRPRWFAIRGGVLAYSKIRRRV 85
Score = 28.3 bits (60), Expect(2) = 9e-08
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 323 GSVKVSVCQINVNTIDNTRLDLVIPGQQHMYLRAPSPQDRQKWLVALGSAKA 478
G V + + + + D+ R ++ P + + LR S +DR W+ AL SA++
Sbjct: 118 GFVPLKISSFSESKSDDKRFYIITPTKT-LQLRTGSAKDRVAWIEALVSARS 168
>12_01_1055 -
10861665-10861829,10862827-10863171,10864374-10864682,
10864813-10864968,10865669-10866117,10869275-10869359,
10869944-10870300,10870672-10871076
Length = 756
Score = 55.2 bits (127), Expect = 1e-07
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVLENGILSYYK 292
GVL KW NY GW+ RWFVLE G+LSYYK
Sbjct: 58 GVLHKWVNYGKGWRLRWFVLEGGVLSYYK 86
Score = 33.9 bits (74), Expect = 0.27
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 323 GSVKVSVCQINVNTIDNTRLDLVIPGQQHMYLRAPSPQDRQKWLVALGSAK 475
G + + V I + D+ RL + G + ++LR + +DR W+ AL +AK
Sbjct: 130 GEIHLKVSSIRASKSDDKRL-YIFSGTKTLHLRCETEEDRNAWIQALQAAK 179
>03_05_0843 +
28126480-28127007,28127092-28127457,28129388-28129487,
28130266-28130546,28130643-28130705,28131276-28131431,
28131913-28132080,28132158-28132298,28132714-28132840,
28132888-28132994,28134142-28134372,28134446-28134559,
28135091-28135261
Length = 850
Score = 53.6 bits (123), Expect = 3e-07
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 200 MEGVLWKWTNYWNGWQTRWFVLENGILSYYK 292
+ G+L+KW NY GW+ RWF L +G+LSYYK
Sbjct: 89 ISGILYKWVNYGRGWRPRWFALHDGVLSYYK 119
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 323 GSVKVSVCQINVNTIDNTRLDLVIPGQQHMYLRAPSPQDRQKWLVALGSAK 475
G + + V + + D+ R + G + ++LRA + +DR W+ AL + K
Sbjct: 171 GEIHLKVSSVRESRSDDRRFS-IFSGTKRLHLRAETREDRAAWVEALQATK 220
>08_01_0359 +
3152483-3152857,3154493-3154855,3155133-3155211,
3155473-3155879,3156342-3156497,3156728-3156895,
3156991-3157131,3157739-3157966,3158063-3158176,
3158293-3158448
Length = 728
Score = 49.6 bits (113), Expect = 5e-06
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVLENGILSYYK 292
GVL KWTNY GW+ RWF L +G+LSY K
Sbjct: 50 GVLHKWTNYGRGWRERWFSLHDGVLSYSK 78
>01_06_1395 + 37010446-37010895
Length = 149
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVLENGILSYYKSQDEVVQGC-KGSVKVSVCQINVNTIDNT-- 376
G L K Y W+ RWFVL+ G L ++K +G + V+ C + V ++T
Sbjct: 26 GWLTKQGEYIKTWRRRWFVLKQGRLFWFKDSGVTRASVPRGVIPVATC-LTVKGAEDTLN 84
Query: 377 ---RLDLVIPGQQHMYLRAPSPQDRQKWLVALG 466
+L P + MY A S +++++W+ ++G
Sbjct: 85 RQFAFELSTPAET-MYFIADSEKEKEEWINSIG 116
>05_05_0038 -
21769936-21770199,21770785-21771198,21771274-21771434,
21771544-21771607,21771682-21771864,21772355-21772520,
21773397-21773528,21775085-21775599
Length = 632
Score = 37.5 bits (83), Expect = 0.022
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVLENGILSYYKSQDEVVQGC--KGSVKVSVCQI--NVNTIDN 373
G L K Y W+ RWFVL+ G L ++K V +G +G + V+ C + N
Sbjct: 42 GWLNKQGEYIKTWRRRWFVLKQGRLFWFKDA-AVTRGSVPRGVIPVATCLTVKGAEDVIN 100
Query: 374 TR--LDLVIPGQQHMYLRAPSPQDRQKWLVALG 466
+ +L P MY A S +++++W+ ++G
Sbjct: 101 RQFAFELSTP-TDTMYFIADSEKEKEEWINSIG 132
>07_03_1554 +
27659995-27660093,27661084-27661120,27661204-27661280,
27662272-27662342,27662512-27662590,27662726-27662828,
27662963-27663082,27663180-27663257,27663416-27663471,
27663588-27663657,27664179-27664266,27664503-27664800,
27664943-27665158,27665521-27665841,27666054-27666103,
27666493-27666553,27666633-27666716,27666926-27667039,
27667134-27667300,27667559-27667628,27668328-27668507,
27668619-27668807
Length = 875
Score = 37.1 bits (82), Expect = 0.029
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Frame = +2
Query: 233 WNGWQTRWFVLENGILSYYKSQDEVVQGCKGSVKVSVCQINVNTI-------DNTRLDLV 391
W W+ RWF+L L ++KS + G V V++ I++N D L ++
Sbjct: 49 WKSWKKRWFILTRTSLVFFKSDPNTLPQRGGEVNVTLGGIDLNNSGSVVVREDKKLLTVL 108
Query: 392 IP-GQ--QHMYLRAPSPQDRQKWLVALGSAKA 478
P G+ + L+A + +D +W AL A A
Sbjct: 109 FPDGRDGRAFTLKAETSEDLFEWKTALEEALA 140
>06_01_0989 +
7672764-7672904,7673017-7673067,7673176-7673296,
7673406-7673510,7673963-7674024,7674398-7674515,
7674596-7674932,7675389-7675536,7675632-7675733,
7675824-7675943,7676436-7676519,7676622-7676749,
7677351-7677435,7677566-7677713,7677971-7678047,
7678187-7678243,7678423-7678561,7678642-7678796,
7679003-7679116,7679208-7679275,7679830-7679996,
7680245-7680453
Length = 911
Score = 34.7 bits (76), Expect = 0.16
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVL--ENGILSYYKSQDEVVQGCKGSVKVSVCQI 352
G L K + NGW RWFVL ++G L Y K Q+E + +G + + C +
Sbjct: 584 GYLLKKSAKTNGWSRRWFVLNEKSGKLGYTKKQEE--RHFRGVITLEECNL 632
>09_02_0480 + 9759271-9759735
Length = 154
Score = 34.3 bits (75), Expect = 0.21
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -1
Query: 314 PELLHLVIYNKKVYHSLTQTILSAIRSNNLSISIKLPPSF*NKFIYFCIIKHGPSVD 144
P+L VI N +V HS+ Q I S I S+ ++ +L F KF F IK G +D
Sbjct: 62 PKLAPDVISNDEVSHSIQQQIASTIDSSVVAFKDQLDAIFKGKFDEFLRIKFGSIMD 118
>08_02_0721 +
20401217-20401360,20401689-20401809,20401969-20402067,
20402790-20402851,20403680-20403797,20404004-20404343,
20404435-20404582,20405043-20405144,20405240-20405359,
20405812-20405895,20405974-20406101,20408314-20408389,
20408556-20408631,20408800-20408876,20408975-20409031,
20409411-20409555,20409634-20409806,20409928-20410054,
20410090-20410192,20410492-20410688,20410946-20411097
Length = 882
Score = 32.3 bits (70), Expect = 0.84
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVL--ENGILSYYKSQDEVVQGCKGSVKVSVCQI 352
G L+K N W RWFVL +G L Y K Q+E + +G + + C +
Sbjct: 540 GFLFKKRAKANDWSNRWFVLNERSGKLGYTKKQEE--RHFRGVINLEECNL 588
>09_04_0735 - 19799648-19800012,19800452-19800536,19802087-19802173
Length = 178
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 506 IIFEDTNTLSHKKSELRLYCDLMMQQVHAVKSAANADTGPELQTINDAT 652
++ DT+ L+ + SEL+L M QQVH ++ A N E+Q + AT
Sbjct: 27 LLQRDTSGLTTENSELKLRLQTMEQQVH-LQDALNDTLKSEVQRLKVAT 74
>12_02_0769 + 23001558-23001995
Length = 145
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 575 MQQVHAVKSAANADTGPELQTINDATSLLTATCDTFIRTLEDIMKLAPPGAPPTTPYEMP 754
++Q + V A A+ G L+++N+ ++ + F DI + PP P P+++P
Sbjct: 80 VEQENTVLRARAAELGDRLRSVNEVLRVV----EEFSGVAMDIQEECPPDDPLLRPWQIP 135
Query: 755 IP 760
P
Sbjct: 136 CP 137
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 206 GVLWKWTNYWNGWQTRWFVL--ENGILSYYKSQDEVVQGCKGSVKVSVCQI 352
G L K + N W RWFVL ++G L Y K Q+E + +G + + C +
Sbjct: 597 GYLLKKSAKNNEWSKRWFVLNEKSGKLGYTKKQEE--RHFRGVIVLEECNL 645
>06_01_0117 +
912780-912959,913754-913828,914059-914112,914848-914913,
915137-915241,915454-915570,915827-915927,916012-916058,
916664-916735,916828-916983,917139-917368,917472-917511,
917603-917736,917830-917931,918726-918770,919129-919206,
919225-919365,919447-919542,919732-919833,920185-920283
Length = 679
Score = 29.9 bits (64), Expect = 4.5
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +2
Query: 245 QTRWFVLENGILSYYKSQ 298
+TR+FVL+N +L+YYK Q
Sbjct: 38 RTRYFVLDNKLLAYYKKQ 55
>03_02_0342 - 7645323-7645909,7646323-7646491
Length = 251
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +2
Query: 599 SAANADTGPELQTINDAT--SLLTATCDTFIRTLEDIMKLAPPGAPPTTPYEMPIPNL 766
+AA AD P ++D T S + C + + PP PP Y+ P P L
Sbjct: 136 AAAAADAAPTYLAVSDDTLFSPVACKCGKYKKKFMFAPPPPPPPRPPAPEYKPPTPTL 193
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,627,681
Number of Sequences: 37544
Number of extensions: 499132
Number of successful extensions: 1446
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1444
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3934202376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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