Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_N20
(1309 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 94 2e-19
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 94 2e-19
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 94 2e-19
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 94 2e-19
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 94 2e-19
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 94 2e-19
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 94 2e-19
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 94 2e-19
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 94 2e-19
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 35 0.15
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 35 0.15
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 35 0.15
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 7 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 66
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 67 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 126
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 6 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 65
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 66 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 125
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 6 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 65
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 66 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 125
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 6 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 65
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 66 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 125
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 7 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 66
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 67 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 126
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 6 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 65
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 66 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 125
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 6 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 65
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 66 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 125
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 7 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 66
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 67 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 126
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 93.9 bits (223), Expect = 2e-19
Identities = 52/120 (43%), Positives = 61/120 (50%)
Frame = +1
Query: 169 MNVRVXXMXAEXEFXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKK 348
+NVRV M +E EF IQ GK DQVVK IG E+W G +KG W KL KK
Sbjct: 6 INVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLNKK 65
Query: 349 VMXXXVKKDILXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXILXDEIXXXXXXXVL 528
V+ VKKD K K Y EDV +E I + ++ Y VK IL DEI VL
Sbjct: 66 VLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETSVL 125
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 34.7 bits (76), Expect = 0.15
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Frame = +1
Query: 178 RVXXMXAEXE-FXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKKVM 354
+V M A+ E I+ G+ + V + IG E W G K W + K +
Sbjct: 17 KVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQNDKTIC 76
Query: 355 XXXVKKDI---LXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXIL 489
++KD K Y EDV E I + + ++ IL
Sbjct: 77 GQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAIL 124
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 34.7 bits (76), Expect = 0.15
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Frame = +1
Query: 178 RVXXMXAEXE-FXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKKVM 354
+V M A+ E I+ G+ + V + IG E W G K W + K +
Sbjct: 17 KVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQNDKTIC 76
Query: 355 XXXVKKDI---LXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXIL 489
++KD K Y EDV E I + + ++ IL
Sbjct: 77 GQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAIL 124
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 34.7 bits (76), Expect = 0.15
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Frame = +1
Query: 178 RVXXMXAEXE-FXIQXXXXGKXXXDQVVKKIGXXEVWXXGXXXXXSKGXXXWXKLYKKVM 354
+V M A+ E I+ G+ + V + IG E W G K W + K +
Sbjct: 17 KVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQNDKTIC 76
Query: 355 XXXVKKDI---LXXXKXXXKXYXEDVXDEXIXEXXLKXXYXXVKXXIL 489
++KD K Y EDV E I + + ++ IL
Sbjct: 77 GQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAIL 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,316,378
Number of Sequences: 27780
Number of extensions: 31558
Number of successful extensions: 39
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3652743978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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