Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N17
         (1277 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120...    29   5.9  
04_04_1129 - 31107892-31110246                                         29   5.9  
02_04_0311 + 21936812-21937861                                         29   5.9  
04_04_0057 + 22410167-22411330                                         29   7.9  

>07_01_0172 -
           1201595-1201912,1202637-1202723,1202836-1202895,
           1203007-1203106,1203227-1203633,1204728-1204883,
           1204981-1205106,1205503-1205572,1205679-1205767
          Length = 470

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +3

Query: 624 DPQPPAAVLAS--SPFVTSQPTEELLREFETVYGAVELTHL 740
           DP  PA V  S  SP +  QP  EL+RE  T+   +E+ HL
Sbjct: 78  DPDHPAPVNLSLESPMLKVQPANELIREVATL--ELEIKHL 116


>04_04_1129 - 31107892-31110246
          Length = 784

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +3

Query: 582 PSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEEL-LREFETV--YGAVELTHLTPPQ 752
           PS+   +S +P +  P P   +LA+S    S PT  L L  +  V  +       L PP+
Sbjct: 103 PSLSAALSALPSQ--PDPALLLLAASSLPASDPTPLLALVAWARVQPWFVPSDDTLLPPR 160

Query: 753 SPPGPATQLL 782
            PP P  QLL
Sbjct: 161 RPPRPGHQLL 170


>02_04_0311 + 21936812-21937861
          Length = 349

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +3

Query: 558 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEE 689
           WLE  V  P    N+ + P    P PPA   +SSP   +   EE
Sbjct: 154 WLEGHVTCPLCRANLEKQPA---PSPPAVEFSSSPAAAAAAAEE 194


>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 558 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 662
           WLE +V  P    N+ + P    P P AA  + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,375,719
Number of Sequences: 37544
Number of extensions: 512529
Number of successful extensions: 1462
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)