Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N14
         (1262 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1016 - 22262760-22264331                                        253   2e-67
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844...   112   6e-25
11_06_0514 - 24477720-24479915                                         30   3.4  
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967...    30   3.4  
01_05_0575 + 23372759-23373676,23373798-23373941,23374065-23374427     29   7.7  

>10_08_1016 - 22262760-22264331
          Length = 523

 Score =  253 bits (620), Expect = 2e-67
 Identities = 115/263 (43%), Positives = 169/263 (64%), Gaps = 4/263 (1%)
 Frame = +1

Query: 172 ILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYLQPPSEWVVCALE 351
           +LCC C V ++ NP+NMC  C+RA VDIT+G+P+ A + +C  C  YLQPP  W+    E
Sbjct: 24  VLCCICGVAMQPNPANMCARCIRARVDITEGVPRHAAVVYCPDCTSYLQPPRSWLRAGPE 83

Query: 352 SREXXXXXXXXXXXXS---RVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGGAVLQQTFIV 522
           S E                RV L  A F ++EPHSKR+++KL ++ EV    VL+QT  V
Sbjct: 84  SPELMQILLRRLNRPLARLRVSLSAAEFVFSEPHSKRLRLKLRLRREVFNAVVLEQTHPV 143

Query: 523 EFTIQHQMCDACHRSEAQ-DYWRALVQVRQRANNRKTFYYLEQLILKHKAHENTLGIKPK 699
           EFT+  ++CDAC R+++  D W A+VQ+RQ   +R+TF YLEQL+LKH      L +   
Sbjct: 144 EFTVHDRLCDACARAQSNPDQWVAVVQLRQHVPHRRTFLYLEQLLLKHGQASLALRVAAA 203

Query: 700 HDGLDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYKFTFSVEIVPLSK 879
             GLDFF+ + +HA ++VDF+ +V P++ Q +K+L+SHD  SN+YNYK TFSVEI P+ +
Sbjct: 204 PGGLDFFFGSRSHAARLVDFLATVAPVQTQTAKQLVSHDTKSNVYNYKHTFSVEICPICR 263

Query: 880 DSVVCLPKKLTQQXGSISPIV*C 948
           + ++ L  ++++  G + PIV C
Sbjct: 264 EDLIALSPQVSRDLGGLGPIVLC 286


>01_07_0232 +
           42182942-42183490,42183593-42183661,42184320-42184451,
           42184547-42184600,42184714-42184758,42185383-42185522,
           42185777-42185902,42185985-42186002,42186631-42187276,
           42188121-42188843
          Length = 833

 Score =  112 bits (269), Expect = 6e-25
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 7/153 (4%)
 Frame = +1

Query: 139 PENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYLQ 318
           PE A+ +  +  +CC C VP+  N +N C  C+R+ VDI  G+P+ A +  C  C  YL 
Sbjct: 428 PEPAAAARTS--ICCTCGVPMAPNAANTCALCIRSRVDIAAGVPRHADVVHCPSCSSYLH 485

Query: 319 PPSEWVVCALESREXXXXXXXXXXXXSR---VKLIDAGFAWTEPHSKRIKVKLTVQGEVI 489
           PP  W+  A ES E                 V L  A F +TEPHS+R+ ++L ++GEV+
Sbjct: 486 PPRLWLRAAPESPELMSLLLRRVDRHIARLGVALAAAEFVFTEPHSRRLMLRLRLRGEVL 545

Query: 490 ----GGAVLQQTFIVEFTIQHQMCDACHRSEAQ 576
               GG  L+Q  +VEF +  ++CDAC  + A+
Sbjct: 546 HGSGGGVTLEQGHVVEFAVHDRLCDACAMARAR 578



 Score = 32.7 bits (71), Expect = 0.63
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 856 VEIVPLSKDSVVCLPKKLTQQXGSISPIV*CTE 954
           V++ P+ +D +V LPK+ ++  G + PIV C +
Sbjct: 592 VQLCPVCRDDLVFLPKEASRDLGGLGPIVLCVK 624


>11_06_0514 - 24477720-24479915
          Length = 731

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +1

Query: 682 LGIKPKHDGLDFFYSTE-NHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYKFTFSV 858
           L  + + D L FF   E   A K+V+ I+ VL  +C HSK L+ H        + FT + 
Sbjct: 246 LSFQDRIDSLSFFRRLEMEQAYKVVE-IELVLMYECLHSKALVIHGRLGRGLRF-FTLAA 303

Query: 859 EIVPL 873
            +V L
Sbjct: 304 PVVSL 308


>01_03_0284 -
           14595643-14595663,14595978-14596018,14596379-14596732,
           14597023-14597494,14597524-14600001
          Length = 1121

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +1

Query: 553 ACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLI--LKHKAHENTLGIK-----PKHDGL 711
           A HR  A+ +  AL +V   AN+    +  E L    K   H   LG+      P H+ +
Sbjct: 60  ASHREGAKAWLEALKKVAYEANDIFDEFKYEALRREAKKNGHYRELGMNAVKLFPTHNRI 119

Query: 712 DFFYSTENHARKMVDFIQ 765
            F Y   N  R++V FI+
Sbjct: 120 VFRYRMGNKLRRIVQFIE 137


>01_05_0575 + 23372759-23373676,23373798-23373941,23374065-23374427
          Length = 474

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 709 LDFFYSTENHARKMVDFIQSVLPIKC--QHSKKLISHDIHSNIYNYKF 846
           +D  ++ + HA+    F Q V P++C   H KK++ HD H +    +F
Sbjct: 357 IDDEFTGQPHAK----FWQEVCPVECINSHVKKIVFHDFHGDKCELEF 400


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,509,167
Number of Sequences: 37544
Number of extensions: 490609
Number of successful extensions: 898
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3910923072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)