Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N14
         (1262 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058494-1|AAL13723.1|  521|Drosophila melanogaster GM14705p pro...   403   e-112
AL009194-7|CAA15695.1|  521|Drosophila melanogaster EG:152A3.1 p...   403   e-112
AE014298-354|AAF45744.1|  521|Drosophila melanogaster CG3460-PA ...   403   e-112
AJ238705-1|CAB42049.1|  521|Drosophila melanogaster Nmd3 protein...   403   e-112
AE014296-3383|AAF51617.2|  405|Drosophila melanogaster CG5078-PA...    30   7.7  
AE014134-105|AAF51496.1|  549|Drosophila melanogaster CG13691-PA...    30   7.7  

>AY058494-1|AAL13723.1|  521|Drosophila melanogaster GM14705p
           protein.
          Length = 521

 Score =  403 bits (993), Expect = e-112
 Identities = 179/269 (66%), Positives = 213/269 (79%)
 Frame = +1

Query: 136 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 315
           A +     +N  ILCC+C V I+ NP+NMCV CLR HVDIT+ IPKQA L FCR CERYL
Sbjct: 13  AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYL 72

Query: 316 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 495
           QPP+EW+  ALESRE              VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73  QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132

Query: 496 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 675
            +LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192

Query: 676 NTLGIKPKHDGLDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYKFTFS 855
           NTLGIKP+H GLDFFY+ +NHAR+MVDF+ +++P K   SK+LISHDIHSN YNYK+ +S
Sbjct: 193 NTLGIKPEHGGLDFFYANDNHARRMVDFLLTMVPGKVTTSKRLISHDIHSNNYNYKYNWS 252

Query: 856 VEIVPLSKDSVVCLPKKLTQQXGSISPIV 942
           VEI P+SKDS VCL KKL  Q G++SP+V
Sbjct: 253 VEIAPVSKDSAVCLSKKLRHQLGNLSPLV 281


>AL009194-7|CAA15695.1|  521|Drosophila melanogaster EG:152A3.1
           protein.
          Length = 521

 Score =  403 bits (993), Expect = e-112
 Identities = 179/269 (66%), Positives = 213/269 (79%)
 Frame = +1

Query: 136 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 315
           A +     +N  ILCC+C V I+ NP+NMCV CLR HVDIT+ IPKQA L FCR CERYL
Sbjct: 13  AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYL 72

Query: 316 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 495
           QPP+EW+  ALESRE              VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73  QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132

Query: 496 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 675
            +LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192

Query: 676 NTLGIKPKHDGLDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYKFTFS 855
           NTLGIKP+H GLDFFY+ +NHAR+MVDF+ +++P K   SK+LISHDIHSN YNYK+ +S
Sbjct: 193 NTLGIKPEHGGLDFFYANDNHARRMVDFLLTMVPGKVTTSKRLISHDIHSNNYNYKYNWS 252

Query: 856 VEIVPLSKDSVVCLPKKLTQQXGSISPIV 942
           VEI P+SKDS VCL KKL  Q G++SP+V
Sbjct: 253 VEIAPVSKDSAVCLSKKLRHQLGNLSPLV 281


>AE014298-354|AAF45744.1|  521|Drosophila melanogaster CG3460-PA
           protein.
          Length = 521

 Score =  403 bits (993), Expect = e-112
 Identities = 179/269 (66%), Positives = 213/269 (79%)
 Frame = +1

Query: 136 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 315
           A +     +N  ILCC+C V I+ NP+NMCV CLR HVDIT+ IPKQA L FCR CERYL
Sbjct: 13  AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENIPKQAVLHFCRNCERYL 72

Query: 316 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 495
           QPP+EW+  ALESRE              VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73  QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132

Query: 496 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 675
            +LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192

Query: 676 NTLGIKPKHDGLDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYKFTFS 855
           NTLGIKP+H GLDFFY+ +NHAR+MVDF+ +++P K   SK+LISHDIHSN YNYK+ +S
Sbjct: 193 NTLGIKPEHGGLDFFYANDNHARRMVDFLLTMVPGKVTTSKRLISHDIHSNNYNYKYNWS 252

Query: 856 VEIVPLSKDSVVCLPKKLTQQXGSISPIV 942
           VEI P+SKDS VCL KKL  Q G++SP+V
Sbjct: 253 VEIAPVSKDSAVCLSKKLRHQLGNLSPLV 281


>AJ238705-1|CAB42049.1|  521|Drosophila melanogaster Nmd3 protein
           protein.
          Length = 521

 Score =  403 bits (992), Expect = e-112
 Identities = 178/269 (66%), Positives = 213/269 (79%)
 Frame = +1

Query: 136 APENASLSNNTRILCCQCAVPIEANPSNMCVACLRAHVDITDGIPKQATLFFCRGCERYL 315
           A +     +N  ILCC+C V I+ NP+NMCV CLR HVDIT+ +PKQA L FCR CERYL
Sbjct: 13  AADGKGAGSNAVILCCECGVAIQPNPANMCVTCLRNHVDITENVPKQAVLHFCRNCERYL 72

Query: 316 QPPSEWVVCALESREXXXXXXXXXXXXSRVKLIDAGFAWTEPHSKRIKVKLTVQGEVIGG 495
           QPP+EW+  ALESRE              VKL+DAGF WTE HSKRIKVKLTV GE+IGG
Sbjct: 73  QPPNEWIQAALESRELLAICLKKLKGLKEVKLVDAGFIWTEQHSKRIKVKLTVHGEIIGG 132

Query: 496 AVLQQTFIVEFTIQHQMCDACHRSEAQDYWRALVQVRQRANNRKTFYYLEQLILKHKAHE 675
            +LQQ F+VEFT+Q+QMC+ CHR+EA+D+WR LVQVRQRA N+KTFYYLEQLILKHKAHE
Sbjct: 133 TMLQQVFVVEFTVQNQMCNDCHRTEAKDFWRCLVQVRQRAENKKTFYYLEQLILKHKAHE 192

Query: 676 NTLGIKPKHDGLDFFYSTENHARKMVDFIQSVLPIKCQHSKKLISHDIHSNIYNYKFTFS 855
           NTLGIKP+H GLDFFY+ +NHAR+MVDF+ +++P K   SK+LISHDIHSN YNYK+ +S
Sbjct: 193 NTLGIKPEHGGLDFFYANDNHARRMVDFLLTMVPGKVTTSKRLISHDIHSNNYNYKYNWS 252

Query: 856 VEIVPLSKDSVVCLPKKLTQQXGSISPIV 942
           VEI P+SKDS VCL KKL  Q G++SP+V
Sbjct: 253 VEIAPVSKDSAVCLSKKLRHQLGNLSPLV 281


>AE014296-3383|AAF51617.2|  405|Drosophila melanogaster CG5078-PA
           protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 494 PPITSPCTVSFTFILFECGSVQAKPASINLTL 399
           P +   C V FTF+L E G   + PA + LT+
Sbjct: 185 PNVLLLCVVMFTFLLPEAGEYSSVPAYLKLTM 216


>AE014134-105|AAF51496.1|  549|Drosophila melanogaster CG13691-PA
           protein.
          Length = 549

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -1

Query: 449 FECGSVQAKPASINLTLLNPFNLLRQRAKSSRDSNAHTTHSEGGCKYLSQP 297
           FE  +  A+P S   T   P  L  QRA+ +R   A   HS  G    S+P
Sbjct: 138 FERIATAARPGSSIKTAFQPRPLTSQRAQQARSRGAGVAHSSDGRLNSSRP 188


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,516,819
Number of Sequences: 53049
Number of extensions: 890817
Number of successful extensions: 1883
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1883
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6784243965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)