Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N13
         (1339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.      159   2e-40
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    26   2.8  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.8  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score =  159 bits (386), Expect = 2e-40
 Identities = 79/84 (94%), Positives = 82/84 (97%)
 Frame = +2

Query: 260 IYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREVQTSV 439
           IYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIA + SRLAHYNKRSTITSRE+QT+V
Sbjct: 38  IYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIARK-SRLAHYNKRSTITSREIQTAV 96

Query: 440 RLLLPGELAKHAVSEGTKAVTKYT 511
           RLLLPGELAKHAVSEGTKAVTKYT
Sbjct: 97  RLLLPGELAKHAVSEGTKAVTKYT 120


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 628 RAFCRCKCNRNTHTNSVRSCISF 560
           R FC   CN +T  N +  CI F
Sbjct: 846 RIFCHWLCNHSTFGNIILVCIMF 868


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 1001 TKXPXPXXXXXSXXXXXPPPPPPXP 927
            T  P P     +     PPPPPP P
Sbjct: 766  TGMPSPSRSAFADGIGSPPPPPPPP 790


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,826
Number of Sequences: 2352
Number of extensions: 12061
Number of successful extensions: 117
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 153617310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)