Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_N13
(1339 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-7|CAB07654.1| 141|Caenorhabditis elegans Hypothetical pr... 171 1e-42
Z83245-9|CAB05832.1| 122|Caenorhabditis elegans Hypothetical pr... 171 1e-42
Z83245-5|CAB05830.1| 122|Caenorhabditis elegans Hypothetical pr... 171 1e-42
Z81495-1|CAB04061.1| 122|Caenorhabditis elegans Hypothetical pr... 171 1e-42
X15633-2|CAA33642.1| 122|Caenorhabditis elegans histone protein... 171 1e-42
U64845-7|AAC48023.1| 123|Caenorhabditis elegans Histone protein... 171 1e-42
U64843-7|AAF98225.1| 123|Caenorhabditis elegans Histone protein... 171 1e-42
U64843-6|AAF98230.1| 123|Caenorhabditis elegans Histone protein... 171 1e-42
U40934-8|AAK84525.1| 122|Caenorhabditis elegans Histone protein... 171 1e-42
AF047656-5|AAC05103.1| 122|Caenorhabditis elegans Histone prote... 171 1e-42
AC024696-7|AAK84513.1| 141|Caenorhabditis elegans Histone prote... 171 1e-42
AC024696-6|AAK84507.1| 141|Caenorhabditis elegans Histone prote... 171 1e-42
Z92789-3|CAB07220.1| 123|Caenorhabditis elegans Hypothetical pr... 169 3e-42
Z82271-3|CAB05211.1| 123|Caenorhabditis elegans Hypothetical pr... 169 3e-42
Z73102-9|CAA97413.1| 123|Caenorhabditis elegans Hypothetical pr... 169 3e-42
Z70750-5|CAA94740.1| 123|Caenorhabditis elegans Hypothetical pr... 169 3e-42
U58750-8|AAB00648.1| 123|Caenorhabditis elegans Histone protein... 169 3e-42
U64845-11|AAC48034.2| 108|Caenorhabditis elegans Histone protei... 164 1e-40
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 24 5.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 24 5.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 24 6.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 7.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 7.8
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 7.8
>Z93388-7|CAB07654.1| 141|Caenorhabditis elegans Hypothetical
protein T10C6.11 protein.
Length = 141
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 51 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 110
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 111 QTAVRLILPGELAKHAVSEGTKAVTKYT 138
>Z83245-9|CAB05832.1| 122|Caenorhabditis elegans Hypothetical
protein ZK131.9 protein.
Length = 122
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 91
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 92 QTAVRLILPGELAKHAVSEGTKAVTKYT 119
>Z83245-5|CAB05830.1| 122|Caenorhabditis elegans Hypothetical
protein ZK131.5 protein.
Length = 122
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 91
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 92 QTAVRLILPGELAKHAVSEGTKAVTKYT 119
>Z81495-1|CAB04061.1| 122|Caenorhabditis elegans Hypothetical
protein F08G2.1 protein.
Length = 122
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 91
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 92 QTAVRLILPGELAKHAVSEGTKAVTKYT 119
>X15633-2|CAA33642.1| 122|Caenorhabditis elegans histone protein
protein.
Length = 122
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 91
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 92 QTAVRLILPGELAKHAVSEGTKAVTKYT 119
>U64845-7|AAC48023.1| 123|Caenorhabditis elegans Histone protein 8
protein.
Length = 123
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>U64843-7|AAF98225.1| 123|Caenorhabditis elegans Histone protein 20
protein.
Length = 123
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>U64843-6|AAF98230.1| 123|Caenorhabditis elegans Histone protein 22
protein.
Length = 123
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>U40934-8|AAK84525.1| 122|Caenorhabditis elegans Histone protein 29
protein.
Length = 122
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 91
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 92 QTAVRLILPGELAKHAVSEGTKAVTKYT 119
>AF047656-5|AAC05103.1| 122|Caenorhabditis elegans Histone protein
34 protein.
Length = 122
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 32 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 91
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 92 QTAVRLILPGELAKHAVSEGTKAVTKYT 119
>AC024696-7|AAK84513.1| 141|Caenorhabditis elegans Histone protein
54 protein.
Length = 141
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 51 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 110
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 111 QTAVRLILPGELAKHAVSEGTKAVTKYT 138
>AC024696-6|AAK84507.1| 141|Caenorhabditis elegans Histone protein
52 protein.
Length = 141
Score = 171 bits (415), Expect = 1e-42
Identities = 79/88 (89%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 51 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 110
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 111 QTAVRLILPGELAKHAVSEGTKAVTKYT 138
>Z92789-3|CAB07220.1| 123|Caenorhabditis elegans Hypothetical
protein H02I12.6 protein.
Length = 123
Score = 169 bits (412), Expect = 3e-42
Identities = 78/88 (88%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIA+EASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>Z82271-3|CAB05211.1| 123|Caenorhabditis elegans Hypothetical
protein F54E12.4 protein.
Length = 123
Score = 169 bits (412), Expect = 3e-42
Identities = 78/88 (88%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIA+EASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>Z73102-9|CAA97413.1| 123|Caenorhabditis elegans Hypothetical
protein B0035.8 protein.
Length = 123
Score = 169 bits (412), Expect = 3e-42
Identities = 78/88 (88%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIA+EASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>Z70750-5|CAA94740.1| 123|Caenorhabditis elegans Hypothetical
protein C50F4.5 protein.
Length = 123
Score = 169 bits (412), Expect = 3e-42
Identities = 78/88 (88%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIA+EASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>U58750-8|AAB00648.1| 123|Caenorhabditis elegans Histone protein 62
protein.
Length = 123
Score = 169 bits (412), Expect = 3e-42
Identities = 78/88 (88%), Positives = 88/88 (100%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YIY+VLKQVHPDTG+SSKAMSIMNSFVND+FERIA+EASRLAHYNKRSTI+SRE+
Sbjct: 33 ESYSVYIYRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIASEASRLAHYNKRSTISSREI 92
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAKHAVSEGTKAVTKYT
Sbjct: 93 QTAVRLILPGELAKHAVSEGTKAVTKYT 120
>U64845-11|AAC48034.2| 108|Caenorhabditis elegans Histone protein
39 protein.
Length = 108
Score = 164 bits (398), Expect = 1e-40
Identities = 76/88 (86%), Positives = 87/88 (98%)
Frame = +2
Query: 248 ESYAIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIAAEASRLAHYNKRSTITSREV 427
ESY++YI++VLKQVHPDTG+SSKAMSIMNSFVND+FERIAAEASRLAHYNKRSTI+SRE+
Sbjct: 18 ESYSLYIFRVLKQVHPDTGVSSKAMSIMNSFVNDVFERIAAEASRLAHYNKRSTISSREI 77
Query: 428 QTSVRLLLPGELAKHAVSEGTKAVTKYT 511
QT+VRL+LPGELAK+AVSEGT AVTKYT
Sbjct: 78 QTAVRLILPGELAKNAVSEGTNAVTKYT 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -3
Query: 1007 PKTKXPXPXXXXXSXXXXXPPPPPP 933
P T P P PPPPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPP 732
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 950 PPPPPPXP 927
PPPPPP P
Sbjct: 770 PPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -3
Query: 1007 PKTKXPXPXXXXXSXXXXXPPPPPP 933
P T P P PPPPPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPP 732
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 950 PPPPPPXP 927
PPPPPP P
Sbjct: 769 PPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 24.2 bits (50), Expect(2) = 6.0
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -3
Query: 1007 PKTKXPXPXXXXXSXXXXXPPPPPP 933
P T P P PPPPPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPP 315
Score = 23.4 bits (48), Expect(2) = 6.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 950 PPPPPPXP 927
PPPPPP P
Sbjct: 353 PPPPPPPP 360
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(2) = 7.7
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 992 PXPXXXXXSXXXXXPPPPPP 933
P P S PPPPPP
Sbjct: 524 PMPGMAPLSTGAPTPPPPPP 543
Score = 23.4 bits (48), Expect(2) = 7.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 950 PPPPPPXP 927
PPPPPP P
Sbjct: 578 PPPPPPPP 585
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 992 PXPXXXXXSXXXXXPPPPPP 933
P P S PPPPPP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPP 773
Score = 23.4 bits (48), Expect(2) = 7.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 950 PPPPPPXP 927
PPPPPP P
Sbjct: 767 PPPPPPPP 774
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -3
Query: 992 PXPXXXXXSXXXXXPPPPPP 933
P P S PPPPPP
Sbjct: 754 PQPIQQQQSSIPPPPPPPPP 773
Score = 23.4 bits (48), Expect(2) = 7.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 950 PPPPPPXP 927
PPPPPP P
Sbjct: 767 PPPPPPPP 774
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,186,697
Number of Sequences: 27780
Number of extensions: 282283
Number of successful extensions: 1962
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1633
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3756810758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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