Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N12
         (1317 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ...    35   0.57 
AC002398-4|AAB81198.1|  903|Homo sapiens F25965_3 protein.             33   2.3  
AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.           31   7.1  
AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15 pr...    31   9.3  

>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45322 fis, clone BRHIP3006294, moderately
           similar to Mus musculus Cdc42 GTPase-activating protein
           (Cdgap). ).
          Length = 1007

 Score = 35.1 bits (77), Expect = 0.57
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +2

Query: 35  PSSXPVF*ILLHIADRMSQIAEEQKLEESDGLPPASSS 148
           P   P   + L +A+R  Q+AE+Q  +E  G PPAS S
Sbjct: 756 PPKNPARLMALALAERAQQVAEQQSQQECGGTPPASQS 793


>AC002398-4|AAB81198.1|  903|Homo sapiens F25965_3 protein.
          Length = 903

 Score = 33.1 bits (72), Expect = 2.3
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +2

Query: 65  LHIADRMSQIAEEQKLEESDGLPPASSS 148
           L +A+R  Q+AE+Q  +E  G PPAS S
Sbjct: 518 LALAERAQQVAEQQSQQECGGTPPASQS 545


>AF137396-7|AAG41681.1|  326|Homo sapiens HOR5'Beta7 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 7.1
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 784 LVRSPVPTLPLTGYLSAFLPSGSVALSHS 870
           + R PV T+P+   L AF   GSV LSHS
Sbjct: 161 IFRGPVATIPIVLLLKAFPYCGSVVLSHS 189


>AF285605-1|AAK31984.1| 2789|Homo sapiens testis protein TEX15
           protein.
          Length = 2789

 Score = 31.1 bits (67), Expect = 9.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +3

Query: 720 SQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRIPVRLS 839
           SQ W +  G   Y   PP K+  A  C D   +  P+ +S
Sbjct: 123 SQSWAHNMGSEDYDCIPPNKVTMAGQCKDQGNFSFPISVS 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,250,045
Number of Sequences: 237096
Number of extensions: 2750765
Number of successful extensions: 11457
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11450
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 19045995580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)