Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N10
         (1297 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   0.90 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   8.4  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.5 bits (58), Expect = 0.90
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 313 RLQKGAHRTTLPGVLDSDIPYSSGTSISSHLKEVDSGGGGSAEVM-VYSLGWGMGEPE 483
           R+Q+G     + G    +I  + G S+  +L   D+ G GS  V+ V++   G G+ +
Sbjct: 780 RIQQGGDGRFVIGASTGEISITHGASLDPNLLAPDALGSGSTYVLEVFATDGGNGDQQ 837


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 409 EVDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLV 528
           E D G G  AEV+ +  G   G+P  R   ++++Q H  V
Sbjct: 133 EGDDGQGSFAEVVRHKWGRNTGKP--RGYQQQQSQSHRQV 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,463
Number of Sequences: 2352
Number of extensions: 14265
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)