Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N10
         (1297 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084154-3|AAK29869.1|  323|Caenorhabditis elegans Hypothetical ...    45   1e-04
Z81072-2|CAB03023.2|  332|Caenorhabditis elegans Hypothetical pr...    39   0.009
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    31   2.3  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    31   2.3  
L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease pr...    29   9.5  
L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease pr...    29   9.5  
AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered cut...    29   9.5  
AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered cut...    29   9.5  
AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered cut...    29   9.5  
AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered cut...    29   9.5  
AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered cut...    29   9.5  
AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered cut...    29   9.5  

>AC084154-3|AAK29869.1|  323|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.6 protein.
          Length = 323

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 565 DVL-PLHNQVGGHTRLLVLNDSTVIKPXNIRELXFYQNIPEDIQGFVPRYKGVMQXSXXG 741
           DVL P  +QVGGHT    L +  ++KP   RE+ FYQ +P+ ++   P     +Q S   
Sbjct: 20  DVLKPFDHQVGGHTPFTSLPNGHLLKPCEEREILFYQKMPKILKSIAPLCCSTIQGSSVS 79

Query: 742 T 744
           T
Sbjct: 80  T 80


>Z81072-2|CAB03023.2|  332|Caenorhabditis elegans Hypothetical
           protein F30A10.3 protein.
          Length = 332

 Score = 38.7 bits (86), Expect = 0.009
 Identities = 17/50 (34%), Positives = 31/50 (62%)
 Frame = +1

Query: 562 VDVLPLHNQVGGHTRLLVLNDSTVIKPXNIRELXFYQNIPEDIQGFVPRY 711
           +++    +QVGGH  +L+ N   V KP N+RE+ FY+ +  +++ F P +
Sbjct: 1   MELTAFRHQVGGHFGILLCNGH-VAKPSNLREMAFYKVMNSELKHFSPAF 49


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 629  VLSFSTRSLVCPPT*LWSGRTSTSCPSSRDKDECTRVCGCVRXRSALRRSG 477
            V   ST S VCPP  + + +   +C S R    C ++C C    +  R +G
Sbjct: 1350 VCDSSTGSCVCPPGYIGT-KCEIACQSDRFGPTCEKICNCENGGTCDRLTG 1399


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
            protein Y64G10A.7 protein.
          Length = 1651

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -3

Query: 629  VLSFSTRSLVCPPT*LWSGRTSTSCPSSRDKDECTRVCGCVRXRSALRRSG 477
            V   ST S VCPP  + + +   +C S R    C ++C C    +  R +G
Sbjct: 1350 VCDSSTGSCVCPPGYIGT-KCEIACQSDRFGPTCEKICNCENGGTCDRLTG 1399


>L29439-1|AAA98751.1|  658|Caenorhabditis elegans endoprotease
           protein.
          Length = 658

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSSQDSCSADGYTTSVYTLSISSATYDN 371


>L29438-1|AAA98750.1|  684|Caenorhabditis elegans endoprotease
           protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSSQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-6|AAO12410.1|  666|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformf protein.
          Length = 666

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-5|AAB96755.1|  699|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforme protein.
          Length = 699

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-4|AAB96753.1|  670|Caenorhabditis elegans Blistered
           cuticle protein 4, isoforma protein.
          Length = 670

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-3|AAB96756.1|  730|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformb protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-2|AAB96757.1|  827|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformc protein.
          Length = 827

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


>AF039719-1|AAB96754.1|  942|Caenorhabditis elegans Blistered
           cuticle protein 4, isoformd protein.
          Length = 942

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +1

Query: 412 VDSGGGGSAEVMVYSLGWGMGEPERRSADRKRTQPHTLVHSSLSLDD 552
           + +G GG   + V++ G G    +  SAD   T  +TL  SS + D+
Sbjct: 325 IKNGRGGKGNIFVWASGNGGSRQDSCSADGYTTSVYTLSISSATYDN 371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,997,277
Number of Sequences: 27780
Number of extensions: 328549
Number of successful extensions: 900
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3611117266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)