Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_N03
         (1350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich syndrom...    31   7.2  
AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.         31   7.2  
AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.              31   7.2  

>BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich
           syndrome-like protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
 Frame = -1

Query: 567 PXXWGXPXXPPXXXXNXXPPPDXRGXXVXXRGXGXAPQXPTXXPRGLADXXXQXKP--XT 394
           P   G P  PP    N  PPP         RG G  P  P+  P          +P    
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPP------PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAV 334

Query: 393 PPPXP 379
           PPP P
Sbjct: 335 PPPPP 339


>AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
 Frame = -1

Query: 567 PXXWGXPXXPPXXXXNXXPPPDXRGXXVXXRGXGXAPQXPTXXPRGLADXXXQXKP--XT 394
           P   G P  PP    N  PPP         RG G  P  P+  P          +P    
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPP------PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAV 334

Query: 393 PPPXP 379
           PPP P
Sbjct: 335 PPPPP 339


>AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
 Frame = -1

Query: 567 PXXWGXPXXPPXXXXNXXPPPDXRGXXVXXRGXGXAPQXPTXXPRGLADXXXQXKP--XT 394
           P   G P  PP    N  PPP         RG G  P  P+  P          +P    
Sbjct: 281 PPSRGGPPPPPPPPHNSGPPPP------PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAV 334

Query: 393 PPPXP 379
           PPP P
Sbjct: 335 PPPPP 339


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,748,212
Number of Sequences: 237096
Number of extensions: 1175129
Number of successful extensions: 1541
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1457
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19512051704
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)