Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M24
(1266 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein. 232 2e-60
AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygena... 232 2e-60
BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein. 187 9e-47
AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygena... 177 9e-44
AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygena... 144 6e-34
BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 113 1e-24
AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 113 1e-24
AK126701-1|BAC86649.1| 173|Homo sapiens protein ( Homo sapiens ... 31 6.7
>BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein.
Length = 291
Score = 232 bits (567), Expect = 2e-60
Identities = 122/278 (43%), Positives = 160/278 (57%), Gaps = 7/278 (2%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+++ + LG
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQM 134
Query: 488 PAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXX 664
P VVQSMYIFK P G EV HQDA++LYTEP V G WIA+E+AT++NGCLW
Sbjct: 135 PVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSH 194
Query: 665 XXXXXXXLIRNP-DEDSDEALIYDKPAAVYPQSSFTPIPVSKGTCILLHGNVVHKSSHNK 841
++R P + + +PA S F P PV +G +L+HG VVHKS N
Sbjct: 195 TSGVSRRMVRAPVGSAPGTSFLGSEPAR--DNSLFVPTPVQRGALVLIHGEVVHKSKQNL 252
Query: 842 SDKSRHAYTFHVVETYNNLYSTENXLQEGEXXPFXNLY 955
SD+SR AYTFH++E +S EN LQ PF LY
Sbjct: 253 SDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLY 290
>AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 291
Score = 232 bits (567), Expect = 2e-60
Identities = 122/278 (43%), Positives = 160/278 (57%), Gaps = 7/278 (2%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+++ + LG
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQM 134
Query: 488 PAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXX 664
P VVQSMYIFK P G EV HQDA++LYTEP V G WIA+E+AT++NGCLW
Sbjct: 135 PVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSH 194
Query: 665 XXXXXXXLIRNP-DEDSDEALIYDKPAAVYPQSSFTPIPVSKGTCILLHGNVVHKSSHNK 841
++R P + + +PA S F P PV +G +L+HG VVHKS N
Sbjct: 195 TSGVSRRMVRAPVGSAPGTSFLGSEPAR--DNSLFVPTPVQRGALVLIHGEVVHKSKQNL 252
Query: 842 SDKSRHAYTFHVVETYNNLYSTENXLQEGEXXPFXNLY 955
SD+SR AYTFH++E +S EN LQ PF LY
Sbjct: 253 SDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLY 290
>BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein.
Length = 270
Score = 187 bits (455), Expect = 9e-47
Identities = 110/278 (39%), Positives = 146/278 (52%), Gaps = 7/278 (2%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQQ--------- 125
Query: 488 PAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXX 664
P G EV HQDA++LYTEP V G WIA+E+AT++NGCLW
Sbjct: 126 ------------PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSH 173
Query: 665 XXXXXXXLIRNPDEDSD-EALIYDKPAAVYPQSSFTPIPVSKGTCILLHGNVVHKSSHNK 841
++R P + + + +PA S F P PV +G +L+HG VVHKS N
Sbjct: 174 TSGVSRRMVRAPVGSAPGTSFLGSEPAR--DNSLFVPTPVQRGALVLIHGEVVHKSKQNL 231
Query: 842 SDKSRHAYTFHVVETYNNLYSTENXLQEGEXXPFXNLY 955
SD+SR AYTFH++E +S EN LQ PF LY
Sbjct: 232 SDRSRQAYTFHLMEASGTTWSPENWLQPTAELPFPQLY 269
>AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 255
Score = 177 bits (430), Expect = 9e-44
Identities = 104/264 (39%), Positives = 140/264 (53%), Gaps = 7/264 (2%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQQ--------- 125
Query: 488 PAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWLXXXXX 664
P G EV HQDA++LYTEP V G WIA+E+AT++NGCLW
Sbjct: 126 ------------PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSH 173
Query: 665 XXXXXXXLIRNPDEDSD-EALIYDKPAAVYPQSSFTPIPVSKGTCILLHGNVVHKSSHNK 841
++R P + + + +PA S F P PV +G +L+HG VVHKS N
Sbjct: 174 TSGVSRRMVRAPVGSAPGTSFLGSEPAR--DNSLFVPTPVQRGALVLIHGEVVHKSKQNL 231
Query: 842 SDKSRHAYTFHVVETYNNLYSTEN 913
SD+SR AYTFH++E +S EN
Sbjct: 232 SDRSRQAYTFHLMEASGTTWSPEN 255
>AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 177
Score = 144 bits (349), Expect = 6e-34
Identities = 76/163 (46%), Positives = 99/163 (60%), Gaps = 6/163 (3%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+++ + LG
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQM 134
Query: 488 PAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIAL 613
P VVQSMYIFK P G EV HQDA++LYTEP V G WIA+
Sbjct: 135 PVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAV 177
>BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 113 bits (272), Expect = 1e-24
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+++ + LG
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQM 134
Query: 488 PAVVQSMYIFKNP 526
P VVQSMYIFK+P
Sbjct: 135 PVVVQSMYIFKSP 147
Score = 31.9 bits (69), Expect = 5.1
Identities = 38/136 (27%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Frame = +3
Query: 552 IKTQHICTQNQLPQL-ASG*LLKKPQFKTAVCGCLEALTGQECTDV*SATQMKTVTRL*S 728
I+T CT++ A G + P+++TAV G A T C S + S
Sbjct: 149 IRTPPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAPTPVVCQGGWSGPLLAQRLVPAS 208
Query: 729 MINLQRFIHNLALHPYRFRKERVYYYTATLYIRAPTTNLIRVATPTLSTWWRHTTICTRP 908
+ Q I +L P + R+ Y RA T+L A PTLST WR
Sbjct: 209 LGQSQPGI-TASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGAR 267
Query: 909 KXGCRKAXTLPLXTCT 956
+ G + P CT
Sbjct: 268 RTGSSQQLNCPFPNCT 283
>AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 113 bits (272), Expect = 1e-24
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 5/133 (3%)
Frame = +2
Query: 143 DGYAILEDFLHVAECDEIKAAGLEFTENLP-DIEERATFSTTEKTHLKDK----YFLESN 307
DG+ +LE FL EC ++ E + + R FST E+ L+ + YFL S
Sbjct: 15 DGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYFLSSG 74
Query: 308 DKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKELGFIE 487
DKIR FFE+G D GN V PE S+NK+GHALH P+F+ T+S +V+++ + LG
Sbjct: 75 DKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQM 134
Query: 488 PAVVQSMYIFKNP 526
P VVQSMYIFK+P
Sbjct: 135 PVVVQSMYIFKSP 147
Score = 33.1 bits (72), Expect = 2.2
Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Frame = +3
Query: 552 IKTQHICTQNQLPQL-ASG*LLKKPQFKTAVCGCLEALTGQECTDV*SATQMKTVTRL*S 728
I+T CT++ A G + P+++TAV G A T C + S + S
Sbjct: 149 IRTPPSCTRSPWAGCWACGSQWRMPRWRTAVSGSSLAPTPVVCQEGWSGPLLAQRLVPAS 208
Query: 729 MINLQRFIHNLALHPYRFRKERVYYYTATLYIRAPTTNLIRVATPTLSTWWRHTTICTRP 908
+ Q I +L P + R+ Y RA T+L A PTLST WR
Sbjct: 209 LGQSQPGI-TASLCPPQCREGPWSSSMEKWYTRASRTSLTARARPTLSTSWRPLAPPGAR 267
Query: 909 KXGCRKAXTLPLXTCT 956
+ G + P CT
Sbjct: 268 RTGSSQQLNCPFPNCT 283
>AK126701-1|BAC86649.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ44747 fis, clone BRACE3028998, moderately
similar to D-beta-hydroxybutyrate dehydrogenase
precursor (EC 1.1.1.30). ).
Length = 173
Score = 31.5 bits (68), Expect = 6.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 798 YYYTATLYIRAPTTNLIRVATPTLSTWWRHTTICTRP 908
+Y ATL R P T L + A + S WR T C+RP
Sbjct: 56 FYQPATLVERGPLTQLYQQAV-SRSRGWRDTQCCSRP 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,398,332
Number of Sequences: 237096
Number of extensions: 3052162
Number of successful extensions: 7105
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7087
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18110209670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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