Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M24
         (1266 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical ...   237   1e-62
Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical pr...    33   0.57 
AF036705-7|AAB95174.1|  324|Caenorhabditis elegans Hypothetical ...    31   1.3  
Z82282-7|CAB05280.2|  584|Caenorhabditis elegans Hypothetical pr...    30   3.0  
Z82053-3|CAB04837.2|  240|Caenorhabditis elegans Hypothetical pr...    29   7.0  
Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical pr...    29   9.2  
AL110471-3|CAB63308.1|  818|Caenorhabditis elegans Hypothetical ...    29   9.2  
AL034364-6|CAA22254.2|  818|Caenorhabditis elegans Hypothetical ...    29   9.2  
AF024503-8|AAG24090.2|  283|Caenorhabditis elegans Hypothetical ...    29   9.2  

>AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical
           protein Y105C5B.9 protein.
          Length = 288

 Score =  237 bits (580), Expect = 1e-62
 Identities = 122/283 (43%), Positives = 169/283 (59%), Gaps = 5/283 (1%)
 Frame = +2

Query: 122 IKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFST-TEKTHLKDKYF 295
           ++ +   DG+ ++E+  +  E DE+K +  +   ++   E  ++ FST  E  H  D YF
Sbjct: 4   LREKFERDGFVVVENVFNDQEIDEMKKSISKIVNDMDLAEHPKSVFSTYDEDKHAADSYF 63

Query: 296 LESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKEL 475
           L S+DKIR FFEEGA+D DG LTV  + +LNK+GH LH L P F   T++ ++++I KE+
Sbjct: 64  LNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEI 123

Query: 476 GFIEPAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWL- 649
           G+ EP VVQSMYIFK P IG  V  H D+T+L  +P   + G WIA++EA+V+NGCL   
Sbjct: 124 GYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCLSFI 183

Query: 650 -XXXXXXXXXXXXLIRNPDEDSDEALIYDKPAAVYPQSSFTPIPVSKGTCILLHGNVVHK 826
                         +R  D      L +      Y QS F  +P+SKG+ IL+HG VVHK
Sbjct: 184 PGSHKDTSSANYRFVRTHDTSGGALLKFIGTRPTYDQSKFQHVPISKGSLILIHGLVVHK 243

Query: 827 SSHNKSDKSRHAYTFHVVETYNNLYSTENXLQEGEXXPFXNLY 955
           S  N S+KSRHAYT HV+E  N  +S +N LQE E   F +LY
Sbjct: 244 SEANTSEKSRHAYTIHVMERKNTKWSEQNWLQETENYKFPDLY 286


>Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical
           protein ZK550.5 protein.
          Length = 328

 Score = 32.7 bits (71), Expect = 0.57
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
 Frame = +2

Query: 419 PIFRCYTYSERVKSICKEL-GFIEPAV--VQSMYIFKNPGIG---SEVVAHQDATYLYTE 580
           P+   Y  +++V  + ++L G  +  +  + +M I K P  G   S    HQD  Y    
Sbjct: 108 PVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGALTSRHPMHQDLIYFPWR 167

Query: 581 PTP-PVGFWIALEEATVQNGCL 643
           P    V  W A+E+   QNGCL
Sbjct: 168 PEELTVCAWTAMEKINKQNGCL 189


>AF036705-7|AAB95174.1|  324|Caenorhabditis elegans Hypothetical
           protein F37C4.8 protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
 Frame = -3

Query: 592 WGSWFCVQICCV--LMCNHFGTNARVLKNIHALHHSR 488
           W +W C   CC    +C  F T+    K + ++ H R
Sbjct: 53  WSNWSCCSACCCPKAVCKQFETSGDKCKTVKSIQHRR 89


>Z82282-7|CAB05280.2|  584|Caenorhabditis elegans Hypothetical
           protein T07G12.10 protein.
          Length = 584

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +2

Query: 146 GYAILEDFLHV--AECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDK 313
           GY +L+D   +  A C+E++   +   EN+P +    TFS T      + Y    N K
Sbjct: 199 GYEVLDDSNKILTANCEEVE---MSLCENIPGVNNARTFSNTPYDDFLNIYSTPKNPK 253


>Z82053-3|CAB04837.2|  240|Caenorhabditis elegans Hypothetical
           protein T26E3.4 protein.
          Length = 240

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +2

Query: 206 GLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEE 334
           G+EFTEN PD     T +  E     ++   ES DK+R   EE
Sbjct: 57  GIEFTENYPDEIPIITLNGIEDAFTAER-IAESIDKLRSVAEE 98


>Z83227-3|CAB05726.2|  241|Caenorhabditis elegans Hypothetical
           protein F45B8.3 protein.
          Length = 241

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 737 VYHRLKPRHCLHLGCGSNVC 678
           V HR K RHC + GCG +VC
Sbjct: 27  VVHRFK-RHCGYNGCGRSVC 45


>AL110471-3|CAB63308.1|  818|Caenorhabditis elegans Hypothetical
           protein W06D4.6 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 507 CIFLRTLALVPKWLHIKTQH-ICTQNQLPQ 593
           CI  RT AL+ K+L +K +H IC +N   Q
Sbjct: 440 CIIRRTSALLTKYLPVKYEHIICCKNSTLQ 469


>AL034364-6|CAA22254.2|  818|Caenorhabditis elegans Hypothetical
           protein W06D4.6 protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 507 CIFLRTLALVPKWLHIKTQH-ICTQNQLPQ 593
           CI  RT AL+ K+L +K +H IC +N   Q
Sbjct: 440 CIIRRTSALLTKYLPVKYEHIICCKNSTLQ 469


>AF024503-8|AAG24090.2|  283|Caenorhabditis elegans Hypothetical
           protein F31F4.11 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 38  VLLXATQYRRYLNXFCFCKFIASIMHDSIKSQLITDGYAILEDFLHVA-ECDEI 196
           ++L    ++   N F   K +++  H+S+ S +I+   AI +DFL+ A  CDE+
Sbjct: 162 IVLFGDDFKFMRNLFSEAK-VSTDAHESVNSIIISQNSAI-DDFLYSAYNCDEV 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,263,768
Number of Sequences: 27780
Number of extensions: 504984
Number of successful extensions: 1377
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3526846804
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)