Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M24
         (1266 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   5.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   5.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   7.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   7.5  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   9.9  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   9.9  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   9.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   9.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   9.9  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 512 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 619
           ++KN  I  E +      Y    P  P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 512 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 619
           ++KN  I  E +      Y    P  P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 836 NKSDKSRHAYTFHVVETYNNLYSTENXLQE 925
           NK++ +   YT  + ETYN +    + L E
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKFRDVLDE 276


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 836 NKSDKSRHAYTFHVVETYNNLYSTENXLQE 925
           NK++ +   YT  + ETYN +    + L E
Sbjct: 247 NKTEYTLKIYTHDIPETYNVVRKFRDVLDE 276


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 515 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 619
           +KN  I  E +      Y    P  P+G WI+++E
Sbjct: 117 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +2

Query: 515 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 619
           +KN  I  E +      Y    P  P+G WI+++E
Sbjct: 342 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 376


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 896 NCCMSPPRGKCRRGDSYQICC 834
           +CC SP    C   +SY   C
Sbjct: 162 SCCNSPENNTCSISNSYTNGC 182


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 520 LKNIHALHHSRLDKAKLFAN 461
           LKN  AL+H + DK  L  N
Sbjct: 436 LKNDEALNHDQPDKYDLIGN 455


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 497 PQPAR*SQALCKCSSRVHYTCNI 429
           PQP    +AL KC +R   TCN+
Sbjct: 701 PQPI--GKALSKCHNRNVTTCNM 721


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 298,479
Number of Sequences: 438
Number of extensions: 6163
Number of successful extensions: 27
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43342743
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)