Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M20
(1310 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0044 - 19198001-19199236 260 2e-69
02_05_0322 - 27926619-27927686 187 2e-47
02_02_0241 - 8204430-8205398 39 0.010
03_05_0621 - 26198985-26199020,26199539-26199652,26200260-262006... 37 0.040
08_02_0130 - 12900202-12900277,12901457-12901536,12901654-129017... 33 0.50
12_01_0207 - 1559491-1559544,1559806-1560161,1560244-1560363,156... 32 0.87
11_01_0204 - 1612505-1612636,1612809-1612926,1613050-1613162,161... 32 0.87
06_03_0175 + 17553447-17553667,17555313-17555467,17555625-175557... 31 1.5
04_03_0278 - 13761999-13762462,13762628-13762727,13763065-137632... 31 2.0
02_02_0528 + 11199799-11200470,11201850-11201951,11202858-112034... 30 3.5
02_05_0890 - 32546918-32547088,32547224-32547334,32547705-325478... 30 4.6
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 30 4.6
11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510 29 6.1
06_03_0940 + 26145746-26145879,26146740-26146821,26147349-261474... 29 6.1
05_05_0042 - 21798255-21798871,21799400-21799777,21799861-218008... 29 6.1
05_04_0034 + 17375987-17376095,17376716-17376885 29 6.1
03_02_1033 + 13550955-13551700,13552837-13553290,13553451-135536... 29 8.1
03_02_1031 + 13541327-13542072,13543209-13543662,13543823-135440... 29 8.1
>02_04_0044 - 19198001-19199236
Length = 411
Score = 260 bits (636), Expect = 2e-69
Identities = 141/277 (50%), Positives = 166/277 (59%), Gaps = 39/277 (14%)
Frame = +2
Query: 269 KRKEIYKYQAPWPLYSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTF 448
KR EIY Y+A W +Y MNWSVR DK++RLA+ S +E++NN VQ++ LDE + + TF
Sbjct: 32 KRSEIYTYEAGWHIYGMNWSVRRDKKYRLAIASLLEQHNNHVQVVQLDESSGDIAPVLTF 91
Query: 449 DHPYPTTKIMWIPDSKGVYPDLLATSGDYLRIWR------------------------AG 556
DHPYP TK M++PD V PDLLATS D+LRIWR
Sbjct: 92 DHPYPPTKTMFVPDPHSVRPDLLATSADHLRIWRIPSPDEAAAAAAASSNSGSVRCNGTA 151
Query: 557 EPYTLFECVLNNNKNSDFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNE 736
P C LN N+NSD+C PLTSFDWN+ DP IGTSSIDTTCTIW +E
Sbjct: 152 SPDVELRCELNGNRNSDYCGPLTSFDWNDADPRRIGTSSIDTTCTIWDVEREA------- 204
Query: 737 VSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMXDLRHLEHSTIIYED--- 907
V TQLIAHDKEVYDIA+ GG +FASV ADGSVR+ DLR EHSTIIYE
Sbjct: 205 ----VDTQLIAHDKEVYDIAW----GGAGVFASVSADGSVRVFDLRDKEHSTIIYESGSG 256
Query: 908 ------------PQHTPXLRLAWNKQDPNYLATIAME 982
TP +RL WNKQDP Y+ATI M+
Sbjct: 257 GSSNSAGADGGAASPTPLVRLGWNKQDPRYMATIIMD 293
>02_05_0322 - 27926619-27927686
Length = 355
Score = 187 bits (455), Expect = 2e-47
Identities = 112/227 (49%), Positives = 141/227 (62%), Gaps = 17/227 (7%)
Frame = +2
Query: 353 LALGSFVEEYNNKVQIISLDE---DTSEFTAKS--TFDHPYPTTKIMWIPDSKGVYPDLL 517
LA GSF+E+ +N+V ++S D + F A +FDHPYP TK+ + P + P LL
Sbjct: 42 LAAGSFLEDLHNRVSLLSFDPVHPTAASFRALPALSFDHPYPPTKLQFHPRAASA-PHLL 100
Query: 518 ATSGDYLRIWRA-----GEPYTL----FECVLNNNKNS--DFCAPLTSFDWNEVDPNLIG 664
A+S D LR+W A T VL+N K S +FCAPLTSFDWNE +P IG
Sbjct: 101 ASSSDALRLWLAPLDDLAATATAAAPELRSVLDNRKTSASEFCAPLTSFDWNEAEPRRIG 160
Query: 665 TSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA 844
T+SIDTTCTIW +E G V+TQLIAHDK V+DIA+ G +FASV A
Sbjct: 161 TASIDTTCTIWDIERGV-----------VETQLIAHDKAVHDIAWGENG----IFASVSA 205
Query: 845 DGSVRMXDLRHLEHSTIIYEDPQ-HTPXLRLAWNKQDPNYLATIAME 982
DGSVR+ DLR EHSTI YE P+ TP LRLAWN+ D +Y+AT+ M+
Sbjct: 206 DGSVRVFDLRDKEHSTIFYESPRPDTPLLRLAWNRYDFHYMATLLMD 252
>02_02_0241 - 8204430-8205398
Length = 322
Score = 38.7 bits (86), Expect = 0.010
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = +2
Query: 632 DWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAG 811
DWN V + ++S D T +W + V+T H+ VY A+S
Sbjct: 118 DWNPVRRDAFLSASWDDTLKLWSPDR----------PASVRT-FRGHEYCVYAAAWSARH 166
Query: 812 GGRDMFASVGADGSVRMXDLRHLEHSTIIYEDPQHT-PXLRLAWNKQDPNYLATIAMER 985
D+FAS D + R+ D+R + +I P H L L W+K DP+ LAT ++++
Sbjct: 167 P--DVFASASGDRTARVWDVREPAPTLVI---PAHDHEVLSLDWDKYDPSILATGSVDK 220
Score = 36.7 bits (81), Expect = 0.040
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 503 YPDLLAT-SGDYL-RIWRAGEPYTLFECVLNNNKNSDFCAPLTSFDWNEVDPNLIGTSSI 676
+PD+ A+ SGD R+W EP ++++ + S DW++ DP+++ T S+
Sbjct: 166 HPDVFASASGDRTARVWDVREPAPTLVIPAHDHE-------VLSLDWDKYDPSILATGSV 218
Query: 677 DTTCTIWGLETGQVLGRVNEVSGH 748
D + +W + + + +++GH
Sbjct: 219 DKSIRVWDVRAPR--APLAQLAGH 240
>03_05_0621 -
26198985-26199020,26199539-26199652,26200260-26200623,
26201232-26201527
Length = 269
Score = 36.7 bits (81), Expect = 0.040
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +2
Query: 665 TSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGA 844
TSS D TC +W + TGQ R++ G + H +V ++ + + +MF S
Sbjct: 64 TSSGDQTCVLWDVTTGQ---RISIFGGEFPS---GHTADVLSLSINSSNS--NMFVSGSC 115
Query: 845 DGSVRMXDLR 874
D +VR+ D+R
Sbjct: 116 DATVRLWDIR 125
>08_02_0130 -
12900202-12900277,12901457-12901536,12901654-12901740,
12902475-12902636,12904766-12904855,12904959-12905078,
12905671-12905798,12905873-12906272
Length = 380
Score = 33.1 bits (72), Expect = 0.50
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 635 WNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKT 757
W ++ +I T+ D T IW ETGQ L ++ GH KT
Sbjct: 154 WGPLNRTII-TAGEDATIRIWDTETGQCLKESDKEQGHQKT 193
>12_01_0207 -
1559491-1559544,1559806-1560161,1560244-1560363,
1561523-1561568,1561741-1561858,1561981-1562093,
1562586-1562658,1562743-1562882,1563005-1563075,
1563228-1563396,1563594-1563659,1564052-1564150,
1564271-1564444,1564720-1564798,1564901-1565007,
1565391-1565435
Length = 609
Score = 32.3 bits (70), Expect = 0.87
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 617 PLTSFDWNEVDPNLIGTSSIDTTCTIWGL 703
P+TS +W+ +P+ + SS D TIW L
Sbjct: 355 PITSVEWSPHEPSTLAVSSADHQLTIWDL 383
>11_01_0204 -
1612505-1612636,1612809-1612926,1613050-1613162,
1613640-1613712,1613797-1613936,1614059-1614129,
1614262-1614430,1614625-1614690,1615081-1615179,
1615298-1615471,1615745-1615823,1615929-1616035,
1616395-1616439
Length = 461
Score = 32.3 bits (70), Expect = 0.87
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 617 PLTSFDWNEVDPNLIGTSSIDTTCTIWGL 703
P+TS +W+ +P+ + SS D TIW L
Sbjct: 355 PITSVEWSPHEPSTLAVSSADHQLTIWDL 383
>06_03_0175 +
17553447-17553667,17555313-17555467,17555625-17555713,
17556253-17556376,17556920-17556989,17557345-17557441,
17559365-17559427,17559504-17559581,17559675-17559737
Length = 319
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 620 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVK 754
L DWN+ N++ ++S D T IW + G+ + + VK
Sbjct: 210 LIGIDWNKEYTNILASASADKTVKIWDVAAGKCVTTLEHHDAKVK 254
>04_03_0278 -
13761999-13762462,13762628-13762727,13763065-13763289,
13763347-13763415,13763605-13764432,13764706-13764779,
13818821-13818905
Length = 614
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 723 PKTCPVSKPQMVQVVSILLVPMRLGSTSFQSKDVRGAQKSEFLLLFRTHSNNVYGS 556
PK+CP S PQ V + + + + L TSF ++++ K E L +S N Y S
Sbjct: 271 PKSCP-SSPQDVVLNNFQEITLILHDTSFDKENLQAKDKFETSTLEDENSTNEYES 325
>02_02_0528 +
11199799-11200470,11201850-11201951,11202858-11203487,
11204287-11204547
Length = 554
Score = 30.3 bits (65), Expect = 3.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 635 WNEVDPNLIGTSSIDTTCTIWGLE 706
WN +P+++ ++S D T IWGL+
Sbjct: 495 WNPANPHMLASASDDHTIRIWGLK 518
>02_05_0890 -
32546918-32547088,32547224-32547334,32547705-32547884,
32547960-32548064,32548333-32548431,32548524-32548679,
32548772-32548850,32549213-32549278,32549382-32549536,
32549675-32550034,32550150-32550305,32550779-32550856,
32551471-32551812
Length = 685
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 620 LTSFDWNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAF 799
L+ WN+ N+I +S + T+W ++T Q + E H+K + + F
Sbjct: 433 LSCLSWNKYSKNVIASSDYEGIVTVWDVQTRQSVMEYEE-----------HEKRAWSVDF 481
Query: 800 SR 805
SR
Sbjct: 482 SR 483
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 29.9 bits (64), Expect = 4.6
Identities = 22/80 (27%), Positives = 36/80 (45%)
Frame = +2
Query: 635 WNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGG 814
WN+ N++ ++S D T IW + G+ L HD +V +A+SR
Sbjct: 253 WNKEVRNVLASASADKTVKIWDVSVGK-----------CAVTLEHHDDKVQSVAWSRQ-- 299
Query: 815 GRDMFASVGADGSVRMXDLR 874
++ S D SV M D++
Sbjct: 300 SPEVLLSGSFDKSVAMNDMK 319
>11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510
Length = 964
Score = 29.5 bits (63), Expect = 6.1
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 854 VRMXDLRHLEHSTIIYEDPQHTPXLRLAWNKQDPNYLATIAMERVR 991
V++ D EH++ H L +WN+ + N LAT +ME++R
Sbjct: 510 VKVLDKMREEHNSYAQSTTVHRVALHKSWNQDNKNNLAT-SMEQLR 554
>06_03_0940 +
26145746-26145879,26146740-26146821,26147349-26147427,
26147527-26147624,26148392-26148479,26148589-26148686,
26148881-26148982,26149237-26149281,26150535-26150574,
26150988-26151074,26151254-26151330,26151746-26151808,
26152650-26152766,26152905-26153116,26153690-26153785,
26153869-26153935,26154028-26154081
Length = 512
Score = 29.5 bits (63), Expect = 6.1
Identities = 26/79 (32%), Positives = 36/79 (45%)
Frame = +2
Query: 635 WNEVDPNLIGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGG 814
W+ V+ N I T S D T +W ++TG+ + I H V +A S
Sbjct: 374 WH-VNCNYIATGSSDKTVRLWDVQTGECI-----------RMFIGHRSMVLSLAMS--PD 419
Query: 815 GRDMFASVGADGSVRMXDL 871
GR M AS DG++ M DL
Sbjct: 420 GRYM-ASGDEDGTIMMWDL 437
>05_05_0042 - 21798255-21798871,21799400-21799777,21799861-21800820,
21800918-21800957,21801471-21801766,21802696-21802774,
21803013-21803100,21803189-21803273,21803364-21803625,
21803720-21805027,21806187-21806393,21807288-21807519,
21808267-21808353,21808427-21808735,21808879-21808957,
21809788-21809867,21809952-21810029,21810744-21810831,
21811102-21811241,21811342-21811415,21812043-21812125,
21812403-21812516,21813975-21814136,21814377-21814641
Length = 2036
Score = 29.5 bits (63), Expect = 6.1
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 398 IISLDEDTSEFTAKSTFDHPYPTTKIMWIPD-SKGVYPDLLATSGDYLRIWRAG--EPY 565
+IS D TSE + PT ++ +P G D L TS + L +W EPY
Sbjct: 1184 VISNDRGTSELEHHRGYHRVRPTVAVLPLPSLLVGYQDDWLKTSANCLSLWEKAPLEPY 1242
>05_04_0034 + 17375987-17376095,17376716-17376885
Length = 92
Score = 29.5 bits (63), Expect = 6.1
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -1
Query: 977 WRSWPGSSGPA-CSRPGGAXGCAEG 906
WR W G+ G A C P G G EG
Sbjct: 17 WRQWRGNQGAARCGEPEGGHGWLEG 41
>03_02_1033 +
13550955-13551700,13552837-13553290,13553451-13553648,
13553726-13553807,13554496-13554590
Length = 524
Score = 29.1 bits (62), Expect = 8.1
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 659 IGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV 838
+ T+S D T +W + TG+ L + E H + VY ++F G + AS
Sbjct: 329 LATASFDKTWRLWDVSTGKEL-LLQE----------GHSRSVYGVSFHPDG---SLAASC 374
Query: 839 GADGSVRMXDLR 874
G D R+ DLR
Sbjct: 375 GLDAYARVWDLR 386
>03_02_1031 +
13541327-13542072,13543209-13543662,13543823-13544020,
13544098-13544179,13544868-13544962
Length = 524
Score = 29.1 bits (62), Expect = 8.1
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 659 IGTSSIDTTCTIWGLETGQVLGRVNEVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASV 838
+ T+S D T +W + TG+ L + E H + VY ++F G + AS
Sbjct: 329 LATASFDKTWRLWDVSTGKEL-LLQE----------GHSRSVYGVSFHPDG---SLAASC 374
Query: 839 GADGSVRMXDLR 874
G D R+ DLR
Sbjct: 375 GLDAYARVWDLR 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,381,057
Number of Sequences: 37544
Number of extensions: 678018
Number of successful extensions: 1829
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1812
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4097157504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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