Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M15
         (1273 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    34   0.96 
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    34   0.96 
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    34   0.96 
Y09912-1|CAA71047.1|  367|Homo sapiens transcription factor AP-2...    31   8.9  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member 2
            protein.
          Length = 498

 Score = 34.3 bits (75), Expect = 0.96
 Identities = 18/63 (28%), Positives = 18/63 (28%)
 Frame = -1

Query: 1129 GXPPXXGXXXXPPXXXXXPXPPXXXXXXXXXXXGXGXGXXXXXPXXPXXGXFXXXXXPPP 950
            G PP       PP     P PP           G G       P  P          PPP
Sbjct: 307  GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPP 366

Query: 949  PPP 941
            PPP
Sbjct: 367  PPP 369


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member 2
            protein.
          Length = 498

 Score = 34.3 bits (75), Expect = 0.96
 Identities = 18/63 (28%), Positives = 18/63 (28%)
 Frame = -1

Query: 1129 GXPPXXGXXXXPPXXXXXPXPPXXXXXXXXXXXGXGXGXXXXXPXXPXXGXFXXXXXPPP 950
            G PP       PP     P PP           G G       P  P          PPP
Sbjct: 307  GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPP 366

Query: 949  PPP 941
            PPP
Sbjct: 367  PPP 369


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein protein.
          Length = 498

 Score = 34.3 bits (75), Expect = 0.96
 Identities = 18/63 (28%), Positives = 18/63 (28%)
 Frame = -1

Query: 1129 GXPPXXGXXXXPPXXXXXPXPPXXXXXXXXXXXGXGXGXXXXXPXXPXXGXFXXXXXPPP 950
            G PP       PP     P PP           G G       P  P          PPP
Sbjct: 307  GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPP 366

Query: 949  PPP 941
            PPP
Sbjct: 367  PPP 369


>Y09912-1|CAA71047.1|  367|Homo sapiens transcription factor AP-2
           beta protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 21/71 (29%), Positives = 34/71 (47%)
 Frame = -1

Query: 292 SLLLFESLKLSVVIGYICDEYFPVREI*ERYKSSTAEPSG*RQECGGDFQMLLAHTNHF* 113
           SL+  E++ L+   GYIC+  FP + + E       +PS    +      MLLA   +F 
Sbjct: 299 SLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPS----DLHSRKNMLLATKGNFV 354

Query: 112 ERLGLFXLXTG 80
           + L ++   TG
Sbjct: 355 KNLRIYWRRTG 365


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,170,918
Number of Sequences: 237096
Number of extensions: 2445567
Number of successful extensions: 16818
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10444
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18220302130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)