Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M13
         (1286 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    26   0.82 
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    23   5.7  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    23   5.7  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    23   5.7  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    23   5.7  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    23   5.7  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    23   5.7  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    23   5.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          23   5.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          23   5.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          23   5.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          23   5.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          23   5.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          23   5.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   5.7  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    23   5.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    23   5.7  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   7.6  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 576 RIKLARMTALWIGNGCVPPSVLLVLVNEH 662
           R  +  ++ +W+G  C+    LL++ NEH
Sbjct: 156 RRMIVYVSLVWLGAACISLPPLLIMGNEH 184


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
            determiner protein.
          Length = 152

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 118  GSRHIGPLTPFPPRFIP 134


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 366  GSRHIGPLTPFPPRFIP 382


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
            determiner protein.
          Length = 385

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 351  GSRHIGPLTPFPPRFIP 367


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
            determiner protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 1089 GGXHXGPIXAXXPRFXP 1139
            G  H GP+    PRF P
Sbjct: 367  GSRHIGPLTPFPPRFIP 383


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 582 KLARMTALWIGNGC 623
           KL RMT  W+G  C
Sbjct: 1   KLWRMTGTWVGGFC 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,847
Number of Sequences: 438
Number of extensions: 6109
Number of successful extensions: 34
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44183184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)