Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M12
         (1280 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094866-1|AAM11219.1|  224|Drosophila melanogaster RE35104p pro...    44   4e-04
AE014298-2191|AAF48491.2|  224|Drosophila melanogaster CG9245-PA...    44   4e-04

>AY094866-1|AAM11219.1|  224|Drosophila melanogaster RE35104p
           protein.
          Length = 224

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +1

Query: 463 NPIMRAYYTXERXLHYMCACXEAGXASLYVLHFYSXPTXLXVELYRLIAMVTMPTAIVXT 642
           N IMR YY  +  L +MC   E     LY+LHF   P      L++++A +T P A++  
Sbjct: 128 NFIMRLYYQKD-ILTFMCCVNELFYVCLYLLHFTYGPLIFGASLFKILAFLTGPFAVLKA 186

Query: 643 GISXL 657
            IS +
Sbjct: 187 LISVM 191



 Score = 42.3 bits (95), Expect = 0.001
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 270 GALLDXXTX*XGXSXLXVTLXTFXPXXTCWXQLXLAIDVTRXXMYLXTSXLXXR 431
           GA+LD  T   G + L VTL  F P    W QL +AIDV    +++ TS +  R
Sbjct: 67  GAMLDQLTDRCGTTGLLVTLAYFYPRYMFWFQLSIAIDVACHWLFMQTSVVVGR 120



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 164 MPTHXIXXCSXYIISA*LDAVDGHAXRYXXQST 262
           M T+ +     Y+ SA LDAVDG A R   QST
Sbjct: 32  MSTNYVISGWCYVTSALLDAVDGQAARAFNQST 64


>AE014298-2191|AAF48491.2|  224|Drosophila melanogaster CG9245-PA,
           isoform A protein.
          Length = 224

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +1

Query: 463 NPIMRAYYTXERXLHYMCACXEAGXASLYVLHFYSXPTXLXVELYRLIAMVTMPTAIVXT 642
           N IMR YY  +  L +MC   E     LY+LHF   P      L++++A +T P A++  
Sbjct: 128 NFIMRLYYQKD-ILTFMCCVNELFYVCLYLLHFTYGPLIFGASLFKILAFLTGPFAVLKA 186

Query: 643 GISXL 657
            IS +
Sbjct: 187 LISVM 191



 Score = 42.3 bits (95), Expect = 0.001
 Identities = 22/54 (40%), Positives = 29/54 (53%)
 Frame = +3

Query: 270 GALLDXXTX*XGXSXLXVTLXTFXPXXTCWXQLXLAIDVTRXXMYLXTSXLXXR 431
           GA+LD  T   G + L VTL  F P    W QL +AIDV    +++ TS +  R
Sbjct: 67  GAMLDQLTDRCGTTGLLVTLAYFYPRYMFWFQLSIAIDVACHWLFMQTSVVVGR 120



 Score = 29.9 bits (64), Expect = 7.8
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 164 MPTHXIXXCSXYIISA*LDAVDGHAXRYXXQST 262
           M T+ +     Y+ SA LDAVDG A R   QST
Sbjct: 32  MSTNYVISGWCYVTSALLDAVDGQAARAFNQST 64


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,417,090
Number of Sequences: 53049
Number of extensions: 273807
Number of successful extensions: 165
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6906482595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)