Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M11
         (1320 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   6.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 1197 GGGGXXXXXPGXXLXXGGGXPPPGGG 1274
            GGGG     PG      GG  P GGG
Sbjct: 203  GGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 837 GXGGGGXXKXXPPXPRGGGG 778
           G  GGG      P P GGGG
Sbjct: 210 GAPGGGGGSSGGPGPGGGGG 229


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +3

Query: 528 GGGGXXPXGGGXGXPXXKKXXGGXXPP 608
           GGGG  P G G G    K       PP
Sbjct: 764 GGGGPPPDGSGSGSRCSKPSVTSTTPP 790



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 525 GGGGGXXPXGGGXGXPXXKK 584
           GGGGG    GGG G    +K
Sbjct: 563 GGGGGGGRAGGGVGATGAEK 582


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +3

Query: 528  GGGGXXPXGGGXGXPXXKKXXGGXXPPPXXGG 623
            GGGG      G G P  +K  G   P    GG
Sbjct: 920  GGGGGSGGEEGSGAPKERKRKGEKKPRKSQGG 951


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,037,875
Number of Sequences: 2352
Number of extensions: 20789
Number of successful extensions: 120
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152462631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)