Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M10
(1310 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 495 e-140
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 495 e-140
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 244 e-118
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 303 1e-82
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 236 2e-62
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 236 2e-62
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 220 2e-57
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 3e-32
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 99 3e-21
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 99 3e-21
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 97 3e-20
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 97 3e-20
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 97 3e-20
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 54 3e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 2e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 46 8e-05
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 43 6e-04
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 42 7e-04
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.021
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 36 0.048
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 36 0.048
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 35 0.11
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.26
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.26
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.34
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.78
Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 5.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 5.5
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 5.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 5.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 5.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 5.5
AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical ... 29 7.3
AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical ... 29 7.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 9.6
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 9.6
AF016417-2|AAB65279.2| 533|Caenorhabditis elegans Hypothetical ... 29 9.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 495 bits (1221), Expect = e-140
Identities = 233/289 (80%), Positives = 251/289 (86%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 279
MGKEK HINIVVIGHVDSGKSTTTGH IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 280 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 459
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 460 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 639
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 640 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPGR 819
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 820 PTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMVVFXPXNITTEV 966
PTD+P P + K + PVGRVETG++K G +V F P N+TTEV
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEV 289
Score = 61.7 bits (143), Expect = 1e-09
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +3
Query: 819 PH*QALRLPLQDVYKIGGIGTVPGRQS*NWCVETRYHGXLXPRQHHY*SXSVEMXHEXLX 998
P + LRLPLQDVYKIGGIGTVP + ++ P+ SVEM HE L
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP 300
Query: 999 KAVPGXNVGXXVK 1037
+AVPG NVG VK
Sbjct: 301 EAVPGDNVGFNVK 313
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 495 bits (1221), Expect = e-140
Identities = 233/289 (80%), Positives = 251/289 (86%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 279
MGKEK HINIVVIGHVDSGKSTTTGH IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 280 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 459
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 460 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 639
GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180
Query: 640 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPGR 819
IGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD+I+PP R
Sbjct: 181 IGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQR 240
Query: 820 PTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMVVFXPXNITTEV 966
PTD+P P + K + PVGRVETG++K G +V F P N+TTEV
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEV 289
Score = 61.7 bits (143), Expect = 1e-09
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +3
Query: 819 PH*QALRLPLQDVYKIGGIGTVPGRQS*NWCVETRYHGXLXPRQHHY*SXSVEMXHEXLX 998
P + LRLPLQDVYKIGGIGTVP + ++ P+ SVEM HE L
Sbjct: 241 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP 300
Query: 999 KAVPGXNVGXXVK 1037
+AVPG NVG VK
Sbjct: 301 EAVPGDNVGFNVK 313
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 244 bits (596), Expect(2) = e-118
Identities = 112/117 (95%), Positives = 115/117 (98%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 279
MGKEK HINIVVIGHVDSGKSTTTGH IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 280 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 450
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 199 bits (486), Expect(2) = e-118
Identities = 92/142 (64%), Positives = 108/142 (76%)
Frame = +1
Query: 541 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 720
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 721 MPWFKGWQVERKEGKADGKCLIEALDAILPPGRPTDKPCVFPCKTYTKSVVLVPCPVGRV 900
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+P P + K + PVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 901 ETGVLKXGTMVVFXPXNITTEV 966
ETG++K G +V F P N+TTEV
Sbjct: 234 ETGIIKPGMVVTFAPQNVTTEV 255
Score = 61.7 bits (143), Expect = 1e-09
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +3
Query: 819 PH*QALRLPLQDVYKIGGIGTVPGRQS*NWCVETRYHGXLXPRQHHY*SXSVEMXHEXLX 998
P + LRLPLQDVYKIGGIGTVP + ++ P+ SVEM HE L
Sbjct: 207 PTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLP 266
Query: 999 KAVPGXNVGXXVK 1037
+AVPG NVG VK
Sbjct: 267 EAVPGDNVGFNVK 279
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 303 bits (745), Expect = 1e-82
Identities = 147/172 (85%), Positives = 154/172 (89%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 279
MGKEK HINIVVIGHVDSGKSTTTGH IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 280 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 459
DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120
Query: 460 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 615
GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++
Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 48.8 bits (111), Expect = 8e-06
Identities = 29/69 (42%), Positives = 34/69 (49%)
Frame = +2
Query: 605 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 784
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 785 LKLSMPSCH 811
+L PS H
Sbjct: 212 SRLLTPSSH 220
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 236 bits (578), Expect = 2e-62
Identities = 121/268 (45%), Positives = 173/268 (64%), Gaps = 1/268 (0%)
Frame = +1
Query: 109 EKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 288
+K IN++V+GHVD+GKST GH ++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 289 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 468
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286
Query: 469 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 645
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 646 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPGRPT 825
++ FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+
Sbjct: 345 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 389
Query: 826 DKPCVFPCKTYTKSVVLVPCPVGRVETG 909
D P K G++E+G
Sbjct: 390 DGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 236 bits (578), Expect = 2e-62
Identities = 121/268 (45%), Positives = 173/268 (64%), Gaps = 1/268 (0%)
Frame = +1
Query: 109 EKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 288
+K IN++V+GHVD+GKST GH ++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 289 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 468
+ ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304
Query: 469 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 645
E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 646 YNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPGRPT 825
++ FVP+SG+ G+N+++ ++ W+ DG CL+E +D+ + P P+
Sbjct: 363 FSKP--KFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPS 407
Query: 826 DKPCVFPCKTYTKSVVLVPCPVGRVETG 909
D P K G++E+G
Sbjct: 408 DGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 220 bits (537), Expect = 2e-57
Identities = 114/293 (38%), Positives = 173/293 (59%), Gaps = 2/293 (0%)
Frame = +1
Query: 103 GKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 282
G K HIN+V +GHVD+GKST G ++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 283 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 462
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G
Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223
Query: 463 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 642
EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+
Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283
Query: 643 GYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPGR 819
G+NP + +VP SG G + + T W G C IE +D +LP +
Sbjct: 284 GFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SGPCFIEFIDVLLPSYK 333
Query: 820 PTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMVVFXPXNITTEV-NLW 975
D C K + +G++E+G ++ G +V P +V +W
Sbjct: 334 -RDFNGPVRCTVAEKYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIW 385
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 136 bits (329), Expect = 3e-32
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 279
MGKEK HINIVVIGHVDSGKSTTTGH IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 280 DKLKAER 300
DKLK +
Sbjct: 61 DKLKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 99 bits (238), Expect = 3e-21
Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 5/297 (1%)
Frame = +1
Query: 58 SDITRSX*SVX*PKMGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEA 237
+ ITR+ + K ++N+ IGH+D GK+T T I + + +
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTS------------AITRVQAK- 71
Query: 238 QEMGKGSFKYAWV--LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 411
KG K+ +DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 72 ----KGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 412 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 591
GTSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E E
Sbjct: 128 GTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----E 176
Query: 592 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 771
+ ++ E + G+N GD P +G + EG+ D
Sbjct: 177 DDLDLVEMEARELLSLHGFN-------------GD-------ATPVIRGSALSALEGQ-D 215
Query: 772 GKC---LIEALDAILPPGRPTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMV 933
C LI+ALD++ P R V P + T VG +E GVLK G V
Sbjct: 216 ISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 99 bits (238), Expect = 3e-21
Identities = 95/297 (31%), Positives = 136/297 (45%), Gaps = 5/297 (1%)
Frame = +1
Query: 58 SDITRSX*SVX*PKMGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEA 237
+ ITR+ + K ++N+ IGH+D GK+T T I + + +
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTS------------AITRVQAK- 71
Query: 238 QEMGKGSFKYAWV--LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 411
KG K+ +DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 72 ----KGFAKHIKFDEIDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 412 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 591
GTSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E E
Sbjct: 128 GTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----E 176
Query: 592 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 771
+ ++ E + G+N GD P +G + EG+ D
Sbjct: 177 DDLDLVEMEARELLSLHGFN-------------GD-------ATPVIRGSALSALEGQ-D 215
Query: 772 GKC---LIEALDAILPPGRPTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMV 933
C LI+ALD++ P R V P + T VG +E GVLK G V
Sbjct: 216 ISCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKV 272
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 96.7 bits (230), Expect = 3e-20
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Frame = +1
Query: 106 KEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 285
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 89
Query: 286 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 465
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149
Query: 466 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 639
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199
Query: 640 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD-AILPPG 816
GY P P+ G + K P + G+ K L+E LD + P
Sbjct: 200 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 245
Query: 817 RPTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMV 933
R ++ +F + V G++E G+LK G +
Sbjct: 246 RKVNEEPMFAAEHVYSIVGRGTVITGKLERGILKRGDKI 284
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 96.7 bits (230), Expect = 3e-20
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Frame = +1
Query: 106 KEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 285
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 90
Query: 286 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 465
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 466 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 639
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 640 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD-AILPPG 816
GY P P+ G + K P + G+ K L+E LD + P
Sbjct: 201 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 246
Query: 817 RPTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMV 933
R ++ +F + V G++E G+LK G +
Sbjct: 247 RKVNEEPMFAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 96.7 bits (230), Expect = 3e-20
Identities = 90/279 (32%), Positives = 133/279 (47%), Gaps = 3/279 (1%)
Frame = +1
Query: 106 KEKTHINIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 285
++K H+N+ IGHVD GK+T T I K A G KY + D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTS------------AITKIL--ATSKGAKYRKYEDI-DN 90
Query: 286 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 465
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150
Query: 466 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 639
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + +
Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200
Query: 640 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD-AILPPG 816
GY P P+ G + K P + G+ K L+E LD + P
Sbjct: 201 FGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEAVKQLLEVLDNKFVIPE 246
Query: 817 RPTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMV 933
R ++ +F + V G++E G+LK G +
Sbjct: 247 RKVNEEPMFAAEHVYSIVGRGTVITGKLERGILKRGDKI 285
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 57.2 bits (132), Expect = 2e-08
Identities = 46/148 (31%), Positives = 66/148 (44%)
Frame = +1
Query: 124 NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
N ++ HVD GKST + CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 304 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 483
RGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 484 KNGQTREHALLAFTLGVKQLIVGVNKMD 567
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 54.0 bits (124), Expect = 2e-07
Identities = 47/148 (31%), Positives = 64/148 (43%)
Frame = +1
Query: 124 NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
NI + H+DSGK+T T +Y G ID E+ +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95
Query: 304 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 483
RGITI A + + IID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 484 KNGQTREHALLAFTLGVKQLIVGVNKMD 567
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 53.6 bits (123), Expect = 3e-07
Identities = 38/113 (33%), Positives = 52/113 (46%)
Frame = +1
Query: 124 NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
NI VI HVD+GK+T T +Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73
Query: 304 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 462
RGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect(2) = 2e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 423
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 424 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 567
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
Score = 23.0 bits (47), Expect(2) = 2e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 127 IVVIGHVDSGKST 165
+ ++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 45.6 bits (103), Expect = 8e-05
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Frame = +1
Query: 121 INIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 300
+N+ ++GHVDSGK+T T + E+G S A
Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54
Query: 301 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 477
R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG
Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108
Query: 478 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY--N 651
I QT EH LLA ++I+ +NK D E + + E K+V +K +G N
Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDEN 162
Query: 652 PAAVAFVPISGWHGDNMLE 708
V G+ + ML+
Sbjct: 163 SPIVEMSLADGYFKEEMLQ 181
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 42.7 bits (96), Expect = 6e-04
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGI--DKRTIEKF---EKEAQE----MGK 252
M +++ N+ VI HVD GKST T + K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 253 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 420
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132
Query: 421 QADCAVLIVAAGTG 462
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 42.3 bits (95), Expect = 7e-04
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 100 MGKEKTHINIVVIGHVDSGKSTTTGHWIYKCGGI--DKRTIEKF---EKEAQE----MGK 252
M +++ N+ VI HVD GKST T + K G I K +F K+ QE +
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72
Query: 253 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 420
+ + L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132
Query: 421 QADCAVLIVAAGTG 462
D A+++V +G
Sbjct: 133 VTDGALVVVDCVSG 146
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.021
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 355 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 534
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 535 KQLIVGVNKMDSTEPPYSEPRFEEI 609
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 36.3 bits (80), Expect = 0.048
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +1
Query: 106 KEKTHI-NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 282
K HI N+ ++ HVD GK++ + I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 283 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 447
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 36.3 bits (80), Expect = 0.048
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +1
Query: 106 KEKTHI-NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 282
K HI N+ ++ HVD GK++ + I R G +Y +D
Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59
Query: 283 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 447
+ E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 35.1 bits (77), Expect = 0.11
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +1
Query: 121 INIVVIGHVDSGKSTTTGHWIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 294
+ + V+G D GKST G C G K I F + E+ G K + V + +
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225
Query: 295 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 456
RG ++ A E S VT+ID G + K I G + A L+VAA
Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284
Query: 457 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 636
+ GI+ TREH L L + ++ + KMD + ++I K+VS+ +
Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333
Query: 637 KIG 645
K G
Sbjct: 334 KAG 336
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 33.9 bits (74), Expect = 0.26
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 124 NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
N+ + GH+ GK+T C + ++T +F + E F ++K +
Sbjct: 134 NVAIAGHLHHGKTT-----FLDC--LMEQTHPEFYR--AEDADARFTDILFIEKQRGCSI 184
Query: 304 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 462
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 33.9 bits (74), Expect = 0.26
Identities = 28/113 (24%), Positives = 47/113 (41%)
Frame = +1
Query: 124 NIVVIGHVDSGKSTTTGHWIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
N+ + GH+ GK+T C + ++T +F + E F ++K +
Sbjct: 9 NVAIAGHLHHGKTT-----FLDC--LMEQTHPEFYR--AEDADARFTDILFIEKQRGCSI 59
Query: 304 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 462
+ + I + Y + IID PGH +F M AD V++V A G
Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.34
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 560 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 432
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.78
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 364 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 543
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 544 IVGVNKMDSTEPPYSEPR 597
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>Z81533-8|CAB04332.1| 917|Caenorhabditis elegans Hypothetical protein
F36G9.13 protein.
Length = 917
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 805 LPPGRPTDKPCVFPCKTYTKSVVLVPCPVGRVETGVLKXGTMVVFXPXNITT 960
+PP P P P KT + +LVP PV E K V P + T
Sbjct: 846 VPPPPPPPVPTAPPAKTPETAPLLVPKPVSNAENDAAKPTESVKASPKDAKT 897
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 202 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 202 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 303
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 5.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 623 PHTSRRLATTQLLSLSCPFLD 685
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF067211-3|ABC71845.1| 720|Caenorhabditis elegans Hypothetical
protein B0205.1b protein.
Length = 720
Score = 29.1 bits (62), Expect = 7.3
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 388 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 555
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 445 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 504
Query: 556 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 705
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 505 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 564
Query: 706 EPSTKMPWFKGWQVER 753
+P + M +G +R
Sbjct: 565 DPISSMNIGRGTLAQR 580
>AF067211-2|AAC16990.3| 745|Caenorhabditis elegans Hypothetical
protein B0205.1a protein.
Length = 745
Score = 29.1 bits (62), Expect = 7.3
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 14/136 (10%)
Frame = +1
Query: 388 DFIKNMI-TGTSQADCAVLIV--AAGTGEFEAGISKNGQTREHALLAF-TLGVKQLIVGV 555
DF+ MI +G Q D IV + G+ E ++G R + + TLG ++ ++
Sbjct: 470 DFLAQMIQSGAVQLDENYRIVRYTSNNGKVELSEKRSGVKRRSSTKSSKTLGKRRQVIEK 529
Query: 556 NKMDSTEP---------PYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWH-GDNML 705
D EP P EP +EEI + Y + + P + PI H +
Sbjct: 530 ELSDLDEPEFVGIMHGYPKQEPVYEEIINQDMRYNNEDPHIPPEIEQFPIQAVHLEEPKF 589
Query: 706 EPSTKMPWFKGWQVER 753
+P + M +G +R
Sbjct: 590 DPISSMNIGRGTLAQR 605
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 9.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 121 INIVVIGHVDSGKSTTT 171
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 9.6
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -3
Query: 543 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 385
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 384 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 265
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>AF016417-2|AAB65279.2| 533|Caenorhabditis elegans Hypothetical
protein F17A9.2 protein.
Length = 533
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 178 WIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 297
W+Y C R +EK E AQ F Y +L+++ A+
Sbjct: 230 WLYACNVKPMRKMEKEELTAQPPNASEFPYRELLEEIAAK 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,954,683
Number of Sequences: 27780
Number of extensions: 534057
Number of successful extensions: 1505
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1484
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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