Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M09
(1325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 115 7e-26
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 106 3e-23
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 48 1e-13
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 1.4
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 5.6
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 5.6
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 5.6
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 9.7
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 115 bits (277), Expect = 7e-26
Identities = 76/208 (36%), Positives = 112/208 (53%)
Frame = +1
Query: 106 TYKALIAAQYSGTDVKVAPNFVFGEXNKSEDXLKKFPAGKVPAFESADGKVLLTESNAIA 285
T K LIAA+ + V +A G+ ++ KFP G PAFE G LL + +I
Sbjct: 14 TQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDALLFGAESIG 61
Query: 286 YYXANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLL 465
+ S A QW +++ LLPA +V P + F+K+ VE+ K++L
Sbjct: 62 LHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELN 114
Query: 466 AALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAXQHVLHPSVRXSLINVQRWFLTVAH 645
L+VLD L+ +T+LV ER++LADV V LL A Q+VL + R S++NV RWF TV +
Sbjct: 115 GQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVN 174
Query: 646 QPQVSAVVGSLTLCAAPPTYXPKKXQEL 729
QP V V+G ++L ++ + K EL
Sbjct: 175 QPAVKEVLGEVSLASSVAQFNQAKFTEL 202
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 106 bits (255), Expect = 3e-23
Identities = 57/154 (37%), Positives = 89/154 (57%)
Frame = +1
Query: 268 ESNAIAYYXANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 447
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 448 AKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSTLLHAXQHVLHPSVRXSLINVQRW 627
K++L L+VLD L+ +T+LV ER++LADV V LL A Q+VL + R S++NV RW
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVALDLLPAFQYVLDANARKSIVNVTRW 143
Query: 628 FLTVAHQPQVSAVVGSLTLCAAPPTYXPKKXQEL 729
F TV +QP V V+G ++L ++ + K EL
Sbjct: 144 FRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 177
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 47.6 bits (108), Expect(2) = 1e-13
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 1/130 (0%)
Frame = +1
Query: 106 TYKALIAAQYSGTDVKVAPNFVFGEXNKSEDXLKKFPAGKVPAFESADGKVLLTESNAIA 285
T K LIAA+ + V +A G+ ++ KFP G PAFE G LL + +I
Sbjct: 14 TQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDALLFGAESIG 61
Query: 286 YYXANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLL 465
+ S A QW +++ LLPA +V P + F+K+ VE+ K++L
Sbjct: 62 LHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYKNELN 114
Query: 466 AALK-VLDGH 492
L+ VLD +
Sbjct: 115 GQLQYVLDAN 124
Score = 47.2 bits (107), Expect(2) = 1e-13
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1
Query: 574 QHVLHPSVRXSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYXPKKXQEL 729
Q+VL + R S++NV RWF TV +QP V V+G ++L ++ + K EL
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 169
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 577 HVLHPSVRXSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYXPKKXQEL 729
H L PS+ +L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 31.5 bits (68), Expect = 1.4
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +1
Query: 577 HVLHPSVRXSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYXPKKXQEL 729
H L PS+ +L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 157 APNFVFGEXNKSEDXLKKFPAGKVPAFESADGKVLLTESNAIAYYXANESLRGGDLATQA 336
+P+F+ +++ LK P +P + KVL T + + +Y E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 337 RVWQ 348
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 157 APNFVFGEXNKSEDXLKKFPAGKVPAFESADGKVLLTESNAIAYYXANESLRGGDLATQA 336
+P+F+ +++ LK P +P + KVL T + + +Y E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 337 RVWQ 348
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.5 bits (63), Expect = 5.6
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +1
Query: 157 APNFVFGEXNKSEDXLKKFPAGKVPAFESADGKVLLTESNAIAYYXANESLRGGDLATQA 336
+P+F+ +++ LK P +P + KVL T + + +Y E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 337 RVWQ 348
++WQ
Sbjct: 1085 QIWQ 1088
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 9.7
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 355 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 474
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,185,782
Number of Sequences: 27780
Number of extensions: 447909
Number of successful extensions: 1000
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 998
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3715184046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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