Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M07
(1280 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 100 9e-20
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 76 2e-12
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 72 4e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 6e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 5e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 46 0.002
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.004
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.006
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.079
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.14
UniRef50_UPI0000D55943 Cluster: PREDICTED: similar to Pleckstrin... 36 2.3
UniRef50_A4S5W9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 36 2.3
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 36 3.0
UniRef50_Q3Y0Z4 Cluster: Putative uncharacterized protein; n=1; ... 34 6.9
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 9.1
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 9.1
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 9.1
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 100 bits (239), Expect = 9e-20
Identities = 60/105 (57%), Positives = 65/105 (61%)
Frame = +1
Query: 658 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 837
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 838 GTVKRPRCWRFSIGSXPLTSITKIDAQVXGGETRQDYKXTRRFPL 972
RPR RFSIGS PLTSI K DAQ+ GGETRQDYK RRFPL
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 76.2 bits (179), Expect = 2e-12
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +1
Query: 826 SKRPGTVKRPRCWRFSIGSXPLTSITKIDAQVXGGETRQDYKXTRRFPLE 975
SK+ T R RFSIGS PLTSITKIDAQV GGETRQDYK TRRFPLE
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLE 51
Score = 40.3 bits (90), Expect = 0.10
Identities = 23/55 (41%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 1005 PXRLPDTCXPFLPXEAWGFPIXHPVGXXF---GVGPSXQAGXGXKXPVNPTGGPF 1160
P RLPDTC PF EAW F I H VG PS P +PT P+
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSW--AVCTNPPFSPTAAPY 113
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 71.7 bits (168), Expect = 4e-11
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = +1
Query: 844 VKRPRCWRFSIGSXPLTSITKIDAQVXGGETRQDYKXTRRFPL 972
V+ PR RFSIGS PLTSITK DAQ+ GGETRQDYK TRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 6e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 834 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 721
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 5e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 634 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 801
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 46.0 bits (104), Expect = 0.002
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 733 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSXPLTSITK 906
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 907 IDAQVXGGETRQDYKXTRRFPLET 978
I Q +T+ +YK T FPL++
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.004
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 437 DPDMIRYIDEFGQTTTRMQ 493
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.006
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 753 HSKAVIRLSTESGDNAGKNM 812
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.079
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 632 SALMNRPTRGERRFAYW 682
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.14
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 704 ERGSGRAPNTQTASPRALADSLMQ 633
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI0000D55943 Cluster: PREDICTED: similar to Pleckstrin
homology domain-containing family G member 1; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to
Pleckstrin homology domain-containing family G member 1
- Tribolium castaneum
Length = 1421
Score = 35.9 bits (79), Expect = 2.3
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = -2
Query: 358 ESPGAGLSLNRSQHDAALPSTTPRQE---RKSSTDYSEPR--HRTELYPDLRSRDARVKK 194
+SP G N S + + P QE R +S + PR +RT +Y LRS + + +
Sbjct: 347 KSPQVGNFANLSPCVQKILANVPDQELSKRFNSEETLGPRRGNRTSIYRSLRSPEKHLNR 406
Query: 193 KTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 74
+S+D+ PN +++ +S F ++ S P GS
Sbjct: 407 SNESLDIISPN-VQKMISNFPDAELVLPSSERSKPSRNGS 445
>UniRef50_A4S5W9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 689
Score = 35.9 bits (79), Expect = 2.3
Identities = 27/85 (31%), Positives = 37/85 (43%)
Frame = +3
Query: 63 MLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLTRASRLRRSGYNSV 242
+L PRE ++ R + S+RE RRR P G+R S ++F + R +S
Sbjct: 45 LLCFAPRERPEARATRRERRGARSEREARRRKPRGARSSSRALFL---QANFRFLVADSA 101
Query: 243 RCRGSE*SVDDFRSWRGVVLGRAAS 317
R S D SW VV AS
Sbjct: 102 DLRASSRDADRMASWEDVVRVDVAS 126
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 35.5 bits (78), Expect = 3.0
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +2
Query: 1016 TGYLSAXSPXGSVGLSHXSPCR 1081
TGYLSA P GSV LSH S CR
Sbjct: 11 TGYLSAFLPSGSVALSHSSRCR 32
>UniRef50_Q3Y0Z4 Cluster: Putative uncharacterized protein; n=1;
Enterococcus faecium DO|Rep: Putative uncharacterized
protein - Enterococcus faecium DO
Length = 790
Score = 34.3 bits (75), Expect = 6.9
Identities = 27/76 (35%), Positives = 34/76 (44%)
Frame = -2
Query: 307 LPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFEC 128
LP T P Q R S SE R DL R+ V+ DSIDL + NG+ +
Sbjct: 608 LPKTDPEQYRYKSNINSENEKRIS---DLPKRNQEVQTDDDSIDLPNDNGVEVGTEK-ST 663
Query: 127 ETRLVKSHCLEPPDSR 80
+ L K+ L DSR
Sbjct: 664 KIGLPKAQNLPMKDSR 679
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 9.1
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 843 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 721
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 9.1
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 515 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 682
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 9.1
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 595 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 431
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,067,165,551
Number of Sequences: 1657284
Number of extensions: 19940659
Number of successful extensions: 49182
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 46893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49162
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130794573157
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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