Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M07
         (1280 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    29   0.29 
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       26   2.1  
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    25   3.6  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    25   6.3  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
            protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 0.29
 Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 6/66 (9%)
 Frame = +3

Query: 876  RLXPPDEHHKNRRS---SXRW---RNPTGL*XYXAFPPGNXPRALSCSDPXRLPDTCXPF 1037
            R  PP   +  RRS     RW   R+P       +  P + PR+   S P RLP    PF
Sbjct: 248  RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRRPF 307

Query: 1038 LPXEAW 1055
                 W
Sbjct: 308  FFSSWW 313


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 455 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 547
           ++D  GQ T R +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
 Frame = -2

Query: 334 LNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR-------SRDARVKKKTDSID 176
           L RS   +++ ++T ++  +    Y + R +     DLR         D  ++   D +D
Sbjct: 62  LRRSSRPSSMRASTMKKLNEWLDAYQQERGKGRSMTDLRLAGYGSSEEDENLRAPRDFLD 121

Query: 175 LRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGST 71
              PN L++       E    K    EPP+ +  T
Sbjct: 122 AGKPNDLQQEGETLNKEPVETKPQESEPPEMQEVT 156


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 801 LRYPLILWITVLPPLSELIP 742
           +RY  +LW+ +L  +S L+P
Sbjct: 4   VRYHFVLWLLILIGVSSLVP 23


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,096,120
Number of Sequences: 2352
Number of extensions: 20017
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)