Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M06
         (1457 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    32   0.99 
12_02_1174 - 26696869-26698191                                         31   2.3  
04_03_0904 + 20717005-20718087                                         29   9.2  

>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 32.3 bits (70), Expect = 0.99
 Identities = 29/143 (20%), Positives = 33/143 (23%)
 Frame = -3

Query: 1443 PPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXXPXL 1264
            PPP + +           PPPP       Y     P      P        P     P  
Sbjct: 551  PPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPP- 609

Query: 1263 TXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPPRXX 1084
               P  +     PP          P       P   P    P    P    K   PP   
Sbjct: 610  PILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPP 669

Query: 1083 XHXXXXXXPPTXXNXNPKXXPPP 1015
                     PT    + K  PPP
Sbjct: 670  PPPRSSSRTPTGAATSSKGPPPP 692


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 31.1 bits (67), Expect = 2.3
 Identities = 28/144 (19%), Positives = 32/144 (22%)
 Frame = -3

Query: 1446 KPPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXXPX 1267
            +PPP               PPPP          P         P        P     P 
Sbjct: 140  RPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPP 199

Query: 1266 LTXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPPRX 1087
                P        PP       P  P       P   P    P+   P   P+   P + 
Sbjct: 200  SVKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRA--PVKM 257

Query: 1086 XXHXXXXXXPPTXXNXNPKXXPPP 1015
                     PP      P   PPP
Sbjct: 258  PRVLEPKPSPPP-----PSPLPPP 276


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 29.1 bits (62), Expect = 9.2
 Identities = 34/148 (22%), Positives = 37/148 (25%), Gaps = 2/148 (1%)
 Frame = -3

Query: 1452 QXKPPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXX 1273
            Q KP P   +T        K  P P    T     PT P    +          P     
Sbjct: 181  QPKPTP-TPYTPTPTPPSYKPQPKP--TPTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPN 237

Query: 1272 PXLTXTP-PXTXXXXXPPXXXXXXXPX-KPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXH 1099
            P  T  P P T      P       P  KP       P   P      T  P       +
Sbjct: 238  PPPTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPN 297

Query: 1098 PPRXXXHXXXXXXPPTXXNXNPKXXPPP 1015
            PP            PT     PK  P P
Sbjct: 298  PPPTYKPQPKPTPTPTPYKPQPKPTPSP 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,524,859
Number of Sequences: 37544
Number of extensions: 136369
Number of successful extensions: 237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4640843200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)