Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_M06
         (1457 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p pro...    36   0.18 
AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA...    36   0.18 
AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB...    36   0.18 
AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p pro...    31   5.2  
AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA...    31   5.2  

>AY119485-1|AAM50139.1|  846|Drosophila melanogaster GH07623p protein.
          Length = 846

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 31/143 (21%), Positives = 31/143 (21%)
 Frame = -3

Query: 1443 PPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXXPXL 1264
            PP  N             PPPP          P  P      P        P     P L
Sbjct: 89   PPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTL 148

Query: 1263 TXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPPRXX 1084
               PP       PP       P  P       P   P    P    P    K   PP   
Sbjct: 149  VPPPPPAPPTIKPP-----PPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPA 203

Query: 1083 XHXXXXXXPPTXXNXNPKXXPPP 1015
                    PP      P   P P
Sbjct: 204  PAEVEPPPPPAPTELEPPPPPAP 226


>AE014297-4203|AAF56763.2| 1109|Drosophila melanogaster CG5514-PA,
            isoform A protein.
          Length = 1109

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 31/143 (21%), Positives = 31/143 (21%)
 Frame = -3

Query: 1443 PPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXXPXL 1264
            PP  N             PPPP          P  P      P        P     P L
Sbjct: 352  PPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTL 411

Query: 1263 TXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPPRXX 1084
               PP       PP       P  P       P   P    P    P    K   PP   
Sbjct: 412  VPPPPPAPPTIKPP-----PPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPA 466

Query: 1083 XHXXXXXXPPTXXNXNPKXXPPP 1015
                    PP      P   P P
Sbjct: 467  PAEVEPPPPPAPTELEPPPPPAP 489


>AE014297-4202|AAN14134.1| 1150|Drosophila melanogaster CG5514-PB,
            isoform B protein.
          Length = 1150

 Score = 35.5 bits (78), Expect = 0.18
 Identities = 31/143 (21%), Positives = 31/143 (21%)
 Frame = -3

Query: 1443 PPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXXPXL 1264
            PP  N             PPPP          P  P      P        P     P L
Sbjct: 352  PPKVNPPPPPRPASPKVEPPPPAPPGVESPPGPQPPASPRFDPPPPHTIEPPPPPAPPTL 411

Query: 1263 TXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPPRXX 1084
               PP       PP       P  P       P   P    P    P    K   PP   
Sbjct: 412  VPPPPPAPPTIKPP-----PPPAPPTVEPPPPPPPAPPTVEPPPPPPPAPTKVEPPPPPA 466

Query: 1083 XHXXXXXXPPTXXNXNPKXXPPP 1015
                    PP      P   P P
Sbjct: 467  PAEVEPPPPPAPTELEPPPPPAP 489


>AY071124-1|AAL48746.1|  420|Drosophila melanogaster RE17165p protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 34/158 (21%), Positives = 36/158 (22%)
 Frame = -3

Query: 1452 QXKPPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXX 1273
            Q  PPP               PPPP    T  Y  PT P      P        P     
Sbjct: 207  QPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPP----PGPGPAQPAPQPPRPQP 262

Query: 1272 PXLTXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPP 1093
            P      P       PP       P +P       P   P    P    P   P+   PP
Sbjct: 263  PRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAP-VPEYGPPPPAP-PAGPTYQPRPPAPP 320

Query: 1092 RXXXHXXXXXXPPTXXNXNPKXXPPPXXXXXXXPXXXT 979
                       PP      P     P       P   T
Sbjct: 321  APAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPT 358


>AE014296-850|AAF47902.2|  420|Drosophila melanogaster CG15021-PA
            protein.
          Length = 420

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 34/158 (21%), Positives = 36/158 (22%)
 Frame = -3

Query: 1452 QXKPPPXNXHTTXXXXXXXKXPPPPHXXXTXXYHXPTXPXXXXKXPXXXXXXXXPXXXXX 1273
            Q  PPP               PPPP    T  Y  PT P      P        P     
Sbjct: 207  QPPPPPPPRPQPTPGYGPPPPPPPPKPQPTPGYGPPTPP----PGPGPAQPAPQPPRPQP 262

Query: 1272 PXLTXTPPXTXXXXXPPXXXXXXXPXKPXXXXKNXPXXXPXXXXPRTXXPXXXPKXXHPP 1093
            P      P       PP       P +P       P   P    P    P   P+   PP
Sbjct: 263  PRPQPPRPQPGSEYLPPPGENEVTPTQPQPTAP-VPEYGPPPPAP-PAGPTYQPRPPAPP 320

Query: 1092 RXXXHXXXXXXPPTXXNXNPKXXPPPXXXXXXXPXXXT 979
                       PP      P     P       P   T
Sbjct: 321  APAPGPTYQPRPPAPPAPAPGPTYQPRPPSPPAPPAPT 358


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,649,145
Number of Sequences: 53049
Number of extensions: 212203
Number of successful extensions: 393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8067062232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)