Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M05
(1252 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 32 0.040
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 30 0.12
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 27 1.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 24 8.1
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 31.9 bits (69), Expect = 0.040
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +1
Query: 259 GEQGIARLKEKARKRKGRGFGNEAGGGSA-----AERGNRGRYDSLAPEGDSGTPGPQRS 423
GE+G KE+ RK + + ++ GGGS A RG+ G DS EG+ ++
Sbjct: 927 GEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKG 986
Query: 424 VEG 432
G
Sbjct: 987 ASG 989
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 30.3 bits (65), Expect = 0.12
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 253 EDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGR--YDSL-APEGDSGTPGPQ 417
E GE G+ K++ G + G + G GR D L P+G G PGPQ
Sbjct: 569 EKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSGLMGRPGNDGLPGPQGQRGLPGPQ 626
Score = 26.2 bits (55), Expect = 2.0
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 310 RGFGNEAGG-GSAAERGNRGRYDSLAPEGDSGTPGP 414
RG E GG G + G G +GD GTPGP
Sbjct: 115 RGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGP 150
Score = 24.2 bits (50), Expect = 8.1
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 337 GSAAERGNRGRYDSLAPEGDSGTPGP 414
G E G +GR + G G PGP
Sbjct: 27 GDKGEMGEQGRTGAQGNAGPPGAPGP 52
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 27.1 bits (57), Expect = 1.1
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +1
Query: 211 DVLDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGNEAGG-GSAAERGNRGRYDSLAP 387
D D E E ++ G QG+ +G E+G G +G RG P
Sbjct: 431 DGFDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGP 490
Query: 388 EGDSGTPG 411
EG G PG
Sbjct: 491 EGLRGEPG 498
Score = 26.2 bits (55), Expect = 2.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +1
Query: 259 GEQGIARLKEKA--RKRKGR-GFGNEAG--GGSAAERGNRGRYDSLAPEGDSGTPGPQ 417
G +G+ LK ++ + GR G + G G + A G GR + P+G G GPQ
Sbjct: 368 GSEGLHGLKGQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPGAPGPKGPRGYEGPQ 425
Score = 25.4 bits (53), Expect = 3.5
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 319 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 411
G + G E G +G L P G SG PG
Sbjct: 619 GEDGTPGLRGEPGPKGEPGLLGPPGPSGEPG 649
Score = 25.0 bits (52), Expect = 4.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 319 GNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQ 417
G + G E+G RG+ +G G PGP+
Sbjct: 426 GPKGMDGFDGEKGERGQMGPKGGQGVPGRPGPE 458
Score = 24.6 bits (51), Expect = 6.1
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Frame = +1
Query: 253 EDGEQGIARLKEKARK-RKGR----GFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPGPQ 417
E G++G+ EK +K KG G G E+G+RG G+ G G +
Sbjct: 269 ERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGEPGEPGRSGEKGQAGDR 328
Query: 418 RSV 426
V
Sbjct: 329 GQV 331
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 310 RGFGNEAG-GGSAAERGNRGRYDSLAPEGDSGTPG 411
RG E G G + G+RG+ +G+ G PG
Sbjct: 310 RGEPGEPGRSGEKGQAGDRGQVGERGHKGEKGLPG 344
Score = 24.6 bits (51), Expect = 6.1
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 244 EVDEDGEQGIARLKEKARKRKGRG-FGNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 411
+V E G +G L + R G FG G +RG+ G + G G PG
Sbjct: 330 QVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLKGQSGPKGEPG 386
Score = 24.2 bits (50), Expect = 8.1
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +1
Query: 253 EDGEQGIARLKEKARKRKGRGF-GNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 411
E G +G+ + RGF G+E G +G G P+GD G G
Sbjct: 101 EKGNRGLPGPMGLKGAKGVRGFPGSEGLPGEKGTKGEPGPVGLQGPKGDRGRDG 154
Score = 24.2 bits (50), Expect = 8.1
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +1
Query: 253 EDGEQGIARLKEKARKRKGRGFGNEAGGGSAAERGNRGRYDSLAPEGDSGTPG 411
E GE G+ +K K G E G +G++GR +G G PG
Sbjct: 668 EKGENGLMGIK--GEKGFPGPVGPEGKMGLRGMKGDKGRPGEAGIDGAPGAPG 718
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.2 bits (50), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 283 KEKARKRKGRGFGNEAGGGSAAE-RGN 360
+++ R+R+G G G GGG + RGN
Sbjct: 238 RDRDREREGGGNGGGGGGGMQLDGRGN 264
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 993,855
Number of Sequences: 2352
Number of extensions: 18478
Number of successful extensions: 77
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143061450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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