Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP18_F_M02
(1435 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 4e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.024
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.17
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.30
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.52
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.52
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.6
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 1.8
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 24 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 8.1
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 9.2
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 4e-04
Identities = 29/95 (30%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = -1
Query: 577 PPPPPXPPRXXXKPXGGGGKKQXXXPPPP-----RXXGXRGKKKKKXXXPPPPPQXXXPK 413
PPPPP R KP G G PPPP G + PPPPP P+
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP----PR 367
Query: 412 PRPXXPXDPPQXXPXK-XQNPKXXPXKXRRRTXXA 311
P PP + NP P R+ A
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPA 402
Score = 36.7 bits (81), Expect = 0.008
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPPXPPRXXX----KPXGGGGKKQXXXPPPPRXXGXRGK 467
P + PP PP PP PPR P K PP R
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALA 305
Query: 466 KKKKXXXPPPPP 431
KK PPPPP
Sbjct: 306 ANKKRPPPPPPP 317
Score = 36.3 bits (80), Expect = 0.010
Identities = 26/106 (24%), Positives = 33/106 (31%), Gaps = 12/106 (11%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXR-----G 470
PP+ P PP PP R K+ PPP R + G
Sbjct: 271 PPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG 330
Query: 469 KKKKKXXXPPPPPQ-------XXXPKPRPXXPXDPPQXXPXKXQNP 353
PPPPP+ P+ R P PP+ P + P
Sbjct: 331 SSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Score = 36.3 bits (80), Expect = 0.010
Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 9/89 (10%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXK---PXGGGGKKQXXXPPPPRXXGXRGKK 464
P + PP G + PPPP PPR P G + PPPPR G++
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG-RSAPPPPPPRSAPSTGRQ 375
Query: 463 ------KKKXXXPPPPPQXXXPKPRPXXP 395
+ PP PP + P P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = -1
Query: 634 PPQAXEXXPPX-PPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPP 494
PP A PP PP P PP PP P G PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 26.6 bits (56), Expect = 8.4
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = -2
Query: 645 PGGXPPRXXKXXPPX-PXGGXXXPPXPPPXPPA 550
P PP PP P G PP PP P A
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.024
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 620 GXXPPPPPXGXXGXPPXPPXXPP 552
G PPPPP G G P PP PP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.1 bits (72), Expect = 0.097
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKK 464
P A P PP PPPPP PP G G PPPP G +
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP-------GVAGAGPPPPPPPPPAVSAGGSR 791
Score = 32.7 bits (71), Expect = 0.13
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -1
Query: 610 PPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKKKKKXXXPPPPP 431
PP PP P P P P GG PPPP G G PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGG------PPPPPPPPGVAG--AGPPPPPPPPP 783
Query: 430 QXXXPKPRPXXPXDPPQXXP 371
R P PQ P
Sbjct: 784 AVSAGGSRYYAP--APQAEP 801
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/51 (31%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPP---XPPRXXXKPXGGGGKKQXXXPPPP 491
PP P P PPP P PP P G PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 996 PXXGXGGAXPPPPXPP 1043
P G GA PPPP PP
Sbjct: 766 PPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 3/48 (6%)
Frame = -3
Query: 1223 PPXPQXXXXXXGP---PRPPXGGXXXXXXXPPAPXXXKXKXPPXXPPP 1089
PP P P P PP PP P PP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.1 bits (57), Expect = 6.4
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -3
Query: 1220 PXPQXXXXXXGPPRPPXGGXXXXXXXPPAPXXXKXKXPPXXPPP 1089
P P PP P GG PP P PP PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPP---PPPPGVAGAGPPPPPPPP 782
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.17
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 631 PQAXEXXPPXPPGGXXXTPPPPPXPP 554
P PP PPG + PPPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.39
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 632 PPGXGXXPPPPPXGXXGXPPXPPXXPPXXXXTRR 531
PPG PPPPP G PP PP R+
Sbjct: 5 PPG-NPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 29.5 bits (63), Expect = 1.2
Identities = 19/49 (38%), Positives = 21/49 (42%)
Frame = -1
Query: 601 PPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKKKKK 455
PPG PPPPP PP G + PPPP G K+K K
Sbjct: 5 PPGN----PPPPPPPP----------GFEPPSQPPPPPPPGYVKKRKNK 39
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 445 PPPPPQXXXPKPRPXXPXDPPQXXPXKXQNP 353
PPPPP P +P P P K + P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.30
Identities = 31/104 (29%), Positives = 32/104 (30%), Gaps = 7/104 (6%)
Frame = -1
Query: 631 PQAXEXXPPXP-PGGXXXTPPP----PPXP-PRXXXKPXGGGGKKQXXXPP-PPRXXGXR 473
P+ PP P P G P P PP P P P K PP PP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP---KPAAGVPPVPPPSEAPP 1199
Query: 472 GKKKKKXXXPPPPPQXXXPKPRPXXPXDPPQXXPXKXQNPKXXP 341
K P PPP P P P PP P P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGL-PPVPVPTAKAPPVPAP 1242
Score = 31.1 bits (67), Expect = 0.39
Identities = 22/87 (25%), Positives = 23/87 (26%)
Frame = -1
Query: 601 PPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKKKKKXXXPPPPPQXX 422
PP T PP P P P G P P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 421 XPKPRPXXPXDPPQXXPXKXQNPKXXP 341
P P+P PP P P P
Sbjct: 1092 PPVPKPSVAA-PPVPKPSVAVPPVPAP 1117
Score = 31.1 bits (67), Expect = 0.39
Identities = 25/92 (27%), Positives = 25/92 (27%), Gaps = 2/92 (2%)
Frame = -1
Query: 610 PPXPPG--GXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKKKKKXXXPPP 437
PP P G PPP P P G PP P G K PP
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA-----PPVPAPSGIPPVPKPSVAAPPV 1104
Query: 436 PPQXXXPKPRPXXPXDPPQXXPXKXQNPKXXP 341
P P P PP P P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 29.5 bits (63), Expect = 1.2
Identities = 29/105 (27%), Positives = 30/105 (28%), Gaps = 5/105 (4%)
Frame = -1
Query: 640 GXPP-QAXEXXPPXPPGGXXXTPPPPPX---PPRXXXKPXGGGGKKQXXXPPPPRXXGXR 473
G PP A PP P P P P PP K PP P G
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 472 GKKKKKXXXPPPPP-QXXXPKPRPXXPXDPPQXXPXKXQNPKXXP 341
K PP P P P+P PP P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAA-PPVPAPSSGIPPVPKP 1184
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.52
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = -1
Query: 541 KPXGGGGKKQXXXPPPPRXXGXRGKKKKKXXXPPPPPQXXXPKPRPXXPXDPPQXXP 371
K GG PP R + PPPP P P P PP P
Sbjct: 1676 KLFGGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 30.7 bits (66), Expect = 0.52
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXKP 536
PPQ PP PP PPPP PP P
Sbjct: 1699 PPQMSAPTPPPPP---MSVPPPPSAPPMPAGPP 1728
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = -1
Query: 667 GGXEXXXAXGXPPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPP 491
GG PP + P PPP PP P G PPPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG---PPSAPPPP 1734
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.7 bits (66), Expect = 0.52
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 536 GFXXXAGGXGGGXGGXXXPPXGXGG 610
GF GG GGG GG P G GG
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 30.7 bits (66), Expect = 0.52
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 536 GFXXXAGGXGGGXGGXXXPPXGXGG 610
GF GG GGG GG P G GG
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 554 GGXGGGXGGXXXPPXGXGGXXFXCLGG 634
GG GG GG PP G GG F GG
Sbjct: 188 GGFGGFGGGSGGPPPGPGG--FGGFGG 212
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 554 GGXGGGXGGXXXPPXGXGGXXFXCLGGXPPGXXXFXXXP 670
GG GGG GG P G GG GG G F P
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGP----GGFGGGLGGFGGGP 258
Score = 27.1 bits (57), Expect = 6.4
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +3
Query: 1005 GXGGAXPPPPXPPXXXXXXGXFXXXXFXXXGXXGXXFX-FXXXGGRGXXXXXXXXXGGXA 1181
G GG PP P G F G G GG G GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 1182 XGAXGXPXXLGGXGXG 1229
G G P GG G
Sbjct: 252 GGFGGGPGGFGGGPGG 267
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.6
Identities = 26/102 (25%), Positives = 30/102 (29%)
Frame = -1
Query: 634 PPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKKKKK 455
PP A P PPPPP PP + Q P G+
Sbjct: 173 PPSAAAPATSLP--SDYNPPPPPPPPPAV---------EDQAADANEPDDYYSSGRAVSP 221
Query: 454 XXXPPPPPQXXXPKPRPXXPXDPPQXXPXKXQNPKXXPXKXR 329
P P+ P P P P PP P + N P R
Sbjct: 222 EIPPTYTPKQADPLPAP--PPPPPPTLPPQSTNTSQLPMPSR 261
Score = 27.5 bits (58), Expect = 4.8
Identities = 22/72 (30%), Positives = 23/72 (31%)
Frame = -1
Query: 619 EXXPPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKKQXXXPPPPRXXGXRGKKKKKXXXPP 440
E P P P PPP PP P Q P P R G + P
Sbjct: 222 EIPPTYTPKQADPLPAPPPPPPPTL--PPQSTNTSQL--PMPSRNVNNLGSQVNI----P 273
Query: 439 PPPQXXXPKPRP 404
PPP PRP
Sbjct: 274 PPPATPSQPPRP 285
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect(2) = 1.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 607 PXPPGGXXXTPPPPP 563
P PGG PPPPP
Sbjct: 280 PMGPGGAPLVPPPPP 294
Score = 21.0 bits (42), Expect(2) = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 445 PPPPPQXXXPKPRP 404
PPPPP P P
Sbjct: 290 PPPPPGMVMASPSP 303
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 23.8 bits (49), Expect(2) = 2.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 580 TPPPPPXPP 554
+PPPPP PP
Sbjct: 369 SPPPPPPPP 377
Score = 22.6 bits (46), Expect(2) = 2.8
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = -1
Query: 445 PPPPPQXXXPKPRPXXPXDPP 383
PPPPP+ P+ D P
Sbjct: 373 PPPPPELLNHSPKSRPLGDKP 393
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.5 bits (58), Expect = 4.8
Identities = 24/99 (24%), Positives = 26/99 (26%), Gaps = 2/99 (2%)
Frame = -1
Query: 673 AGGGXEXXXAXGXPPQAXEXXPPXPPGGXXXTPPPPPXPPRXXXKPXGGGGKK--QXXXP 500
AGG + A P PP PP PPR P P
Sbjct: 106 AGGMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP 165
Query: 499 PPPRXXGXRGKKKKKXXXPPPPPQXXXPKPRPXXPXDPP 383
P P + PP P P P P PP
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVP-PMPPKVPP 203
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 8.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 579 PPXPPPXPPA 550
PP PPP PP+
Sbjct: 306 PPPPPPPPPS 315
Score = 21.4 bits (43), Expect(2) = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 594 GGXXXPPXPPP 562
GG PP PPP
Sbjct: 303 GGLPPPPPPPP 313
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.6 bits (46), Expect(2) = 9.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 1023 PPPPXPPXXXXXXGXF 1070
PPPP PP G F
Sbjct: 947 PPPPPPPLVSAAGGKF 962
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 1017 AXPPPPXPP 1043
A PPPP PP
Sbjct: 943 AFPPPPPPP 951
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,364,406
Number of Sequences: 5004
Number of extensions: 32983
Number of successful extensions: 419
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 798845556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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