Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_L24
         (1301 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    31   1.5  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    31   2.6  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -1

Query: 485 PSPPPLXDXLIXKXPPTXPPXPXTLN 408
           P PPPL + L+   PP  PP P   N
Sbjct: 589 PPPPPLPNCLVPSPPPPPPPPPILPN 614


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -1

Query: 497 NKQTPSPPPLXDXLIXKXP--PTXPPXPXTLNV 405
           N Q   PPP  D ++ K P  P+ PP P  LNV
Sbjct: 147 NWQQNGPPPPPDHVLKKVPSHPSPPPPPAPLNV 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,652,901
Number of Sequences: 37544
Number of extensions: 117340
Number of successful extensions: 468
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)